Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RN7SL354P-201ENST00000469282 294 ntBASIC4.52□□□□□ -1.69
YBX1P67809 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.52□□□□□ -1.69
YBX1P67809 RPL22P13-201ENST00000493291 347 ntBASIC4.52□□□□□ -1.69
YBX1P67809 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
YBX1P67809 AC021146.3-201ENST00000511911 260 ntBASIC4.52□□□□□ -1.69
YBX1P67809 SNORA14.1-201ENST00000516113 141 ntBASIC4.52□□□□□ -1.69
YBX1P67809 RNU1-6P-201ENST00000516290 144 ntBASIC4.52□□□□□ -1.69
YBX1P67809 SCARNA16.2-201ENST00000516520 172 ntBASIC4.52□□□□□ -1.69
YBX1P67809 RNU6-685P-201ENST00000517088 95 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AC134698.5-201ENST00000519444 336 ntBASIC4.52□□□□□ -1.69
YBX1P67809 HMGN1P28-201ENST00000521340 364 ntBASIC4.52□□□□□ -1.69
YBX1P67809 RNU6-323P-201ENST00000521915 107 ntBASIC4.52□□□□□ -1.69
YBX1P67809 DEFB108D-201ENST00000527787 222 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.52□□□□□ -1.69
YBX1P67809 AC022882.1-201ENST00000532142 501 ntBASIC4.52□□□□□ -1.69
YBX1P67809 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.52□□□□□ -1.69
YBX1P67809 AC068446.3-201ENST00000555285 382 ntBASIC4.52□□□□□ -1.69
YBX1P67809 PARP1P2-201ENST00000556806 195 ntBASIC4.52□□□□□ -1.69
YBX1P67809 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
YBX1P67809 AC009570.1-201ENST00000609599 745 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AC107871.2-201ENST00000612894 502 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AL589994.2-201ENST00000621124 579 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AC067931.1-201ENST00000624190 671 ntBASIC4.52□□□□□ -1.69
YBX1P67809 AC091925.2-201ENST00000625059 256 ntBASIC4.52□□□□□ -1.69
YBX1P67809 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.52□□□□□ -1.69
YBX1P67809 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.52□□□□□ -1.69
YBX1P67809 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
YBX1P67809 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
YBX1P67809 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
YBX1P67809 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.52□□□□□ -1.69
YBX1P67809 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
YBX1P67809 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 Y_RNA.2-201ENST00000362330 96 ntBASIC4.51□□□□□ -1.69
YBX1P67809 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 RNU6-393P-201ENST00000384475 107 ntBASIC4.51□□□□□ -1.69
YBX1P67809 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
YBX1P67809 SNORA16.2-201ENST00000390991 127 ntBASIC4.51□□□□□ -1.69
YBX1P67809 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 AL356968.1-201ENST00000416622 474 ntBASIC4.51□□□□□ -1.69
YBX1P67809 AC140479.3-201ENST00000418944 1126 ntBASIC4.51□□□□□ -1.69
YBX1P67809 RPL21P109-201ENST00000422213 475 ntBASIC4.51□□□□□ -1.69
YBX1P67809 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
YBX1P67809 RPL30P3-201ENST00000424262 333 ntBASIC4.51□□□□□ -1.69
YBX1P67809 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
YBX1P67809 MTCO3P45-201ENST00000443036 613 ntBASIC4.51□□□□□ -1.69
YBX1P67809 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.51□□□□□ -1.69
YBX1P67809 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.51□□□□□ -1.69
YBX1P67809 RN7SL432P-201ENST00000484057 298 ntBASIC4.51□□□□□ -1.69
YBX1P67809 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.51□□□□□ -1.69
YBX1P67809 SLC25A15P5-201ENST00000508033 253 ntBASIC4.51□□□□□ -1.69
YBX1P67809 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.51□□□□□ -1.69
YBX1P67809 RNU6-27P-201ENST00000516146 107 ntBASIC4.51□□□□□ -1.69
YBX1P67809 RNU6-1069P-201ENST00000516612 133 ntBASIC4.51□□□□□ -1.69
YBX1P67809 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.51□□□□□ -1.69
YBX1P67809 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.51□□□□□ -1.69
YBX1P67809 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.51□□□□□ -1.69
YBX1P67809 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.51□□□□□ -1.69
YBX1P67809 AC124068.1-201ENST00000563131 678 ntBASIC4.51□□□□□ -1.69
YBX1P67809 ATP5J2P6-201ENST00000565203 266 ntBASIC4.51□□□□□ -1.69
YBX1P67809 RPL23AP84-201ENST00000571193 464 ntBASIC4.51□□□□□ -1.69
YBX1P67809 MIR4284-201ENST00000578924 81 ntBASIC4.51□□□□□ -1.69
YBX1P67809 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.51□□□□□ -1.69
YBX1P67809 AC008745.1-201ENST00000604064 271 ntBASIC4.51□□□□□ -1.69
YBX1P67809 AL161616.1-201ENST00000611867 286 ntBASIC4.51□□□□□ -1.69
YBX1P67809 AC083809.1-201ENST00000615051 472 ntBASIC4.51□□□□□ -1.69
YBX1P67809 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
YBX1P67809 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.51□□□□□ -1.69
YBX1P67809 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
YBX1P67809 AC104118.1-201ENST00000607625 1589 ntBASIC4.51□□□□□ -1.69
YBX1P67809 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
YBX1P67809 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.51□□□□□ -1.69
YBX1P67809 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
YBX1P67809 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
YBX1P67809 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 MFSD8-216ENST00000641147 4009 ntBASIC4.5□□□□□ -1.69
YBX1P67809 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 Y_RNA.152-201ENST00000363578 100 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RNA5SP505-201ENST00000364748 108 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RHOT1P2-201ENST00000366423 333 ntBASIC4.5□□□□□ -1.69
YBX1P67809 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
YBX1P67809 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
YBX1P67809 RNU6-946P-201ENST00000383878 107 ntBASIC4.5□□□□□ -1.69
YBX1P67809 Y_RNA.424-201ENST00000384063 103 ntBASIC4.5□□□□□ -1.69
YBX1P67809 Y_RNA.447-201ENST00000384184 113 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RNU6-306P-201ENST00000384617 107 ntBASIC4.5□□□□□ -1.69
YBX1P67809 Y_RNA.552-201ENST00000384665 112 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RNU6-823P-201ENST00000391042 103 ntBASIC4.5□□□□□ -1.69
YBX1P67809 RNU11-4P-201ENST00000391149 133 ntBASIC4.5□□□□□ -1.69
YBX1P67809 U3.29-201ENST00000391296 212 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms