Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HERVK_113P62684 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HERVK_113P62684 MTND4P35-201ENST00000604257 1375 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HERVK_113P62684 MTCO1P9-201ENST00000505577 1534 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 AC244517.1-201ENST00000606030 2086 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.61□□□□□ -1.67
HERVK_113P62684 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HERVK_113P62684 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 HSPE1P11-201ENST00000339579 310 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.61□□□□□ -1.67
HERVK_113P62684 Y_RNA.67-201ENST00000362870 100 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RNU6-432P-201ENST00000384196 109 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RNU2-39P-201ENST00000410604 198 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 Y_RNA.615-201ENST00000410769 117 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RNU6-516P-201ENST00000411381 104 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.61□□□□□ -1.67
HERVK_113P62684 OR2AS1P-201ENST00000427827 319 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.61□□□□□ -1.67
HERVK_113P62684 MTND1P18-201ENST00000448191 573 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 AL451050.1-201ENST00000450126 415 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 AL121877.1-201ENST00000453704 622 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RNU7-182P-201ENST00000459009 62 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 MRPS17P3-201ENST00000465453 385 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RPL7P49-201ENST00000471402 708 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 AC126389.1-201ENST00000477436 290 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RPS26P15-201ENST00000488067 348 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 AC017037.1-201ENST00000508460 471 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 AC026726.1-201ENST00000512859 601 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.61□□□□□ -1.67
HERVK_113P62684 AC112206.3-201ENST00000514578 389 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RNU1-95P-201ENST00000516357 160 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RNU1-128P-201ENST00000516704 160 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 RNU6-1314P-201ENST00000517139 104 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.61□□□□□ -1.67
HERVK_113P62684 FAM60DP-201ENST00000524174 632 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.61□□□□□ -1.67
HERVK_113P62684 BNIP3P6-201ENST00000549284 499 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.61□□□□□ -1.67
HERVK_113P62684 AL161713.1-201ENST00000555538 145 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 HMGB3P26-201ENST00000560051 582 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.61□□□□□ -1.67
HERVK_113P62684 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HERVK_113P62684 AC067852.4-201ENST00000590314 478 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.61□□□□□ -1.67
HERVK_113P62684 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.61□□□□□ -1.67
HERVK_113P62684 AC009093.8-201ENST00000641769 292 ntBASIC4.61□□□□□ -1.67
HERVK_113P62684 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HERVK_113P62684 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.61□□□□□ -1.67
HERVK_113P62684 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HERVK_113P62684 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HERVK_113P62684 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HERVK_113P62684 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HERVK_113P62684 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.6□□□□□ -1.67
HERVK_113P62684 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HERVK_113P62684 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
HERVK_113P62684 AC087190.4-201ENST00000574616 8334 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HERVK_113P62684 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
HERVK_113P62684 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HERVK_113P62684 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.6□□□□□ -1.67
HERVK_113P62684 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.6□□□□□ -1.67
HERVK_113P62684 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.6□□□□□ -1.67
HERVK_113P62684 RNU6-989P-201ENST00000362756 107 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 RNU6-511P-201ENST00000363496 107 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 Y_RNA.231-201ENST00000364358 102 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 RNU4-66P-201ENST00000365199 138 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 SNORA5A-201ENST00000384111 134 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HERVK_113P62684 TXNP7-201ENST00000406296 293 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 RNU6-1148P-201ENST00000410992 104 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.6□□□□□ -1.67
HERVK_113P62684 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 NDUFB4P5-201ENST00000415445 361 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AL391219.1-201ENST00000422570 483 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 ERLEC1P1-201ENST00000433806 578 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 RPL23AP83-201ENST00000434984 473 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.6□□□□□ -1.67
HERVK_113P62684 IFNA20P-201ENST00000436840 528 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 HMGB3P9-201ENST00000441799 583 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 HMGN2P26-201ENST00000463169 339 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AC006517.1-201ENST00000480485 328 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.6□□□□□ -1.67
HERVK_113P62684 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.6□□□□□ -1.67
HERVK_113P62684 RNU4-49P-201ENST00000516080 140 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 NARSP2-201ENST00000518524 679 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.6□□□□□ -1.67
HERVK_113P62684 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.6□□□□□ -1.67
HERVK_113P62684 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms