Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 Y_RNA.132-201ENST00000363421 102 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 RNU6-288P-201ENST00000363690 104 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 SNORD116-29-201ENST00000384516 83 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 MIR124-3-201ENST00000384866 87 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 SNORA16.2-201ENST00000390991 127 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 SNORA74C-2-201ENST00000411179 201 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 MTCO2P27-201ENST00000420740 428 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 RPL7AP25-201ENST00000423357 805 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.93□□□□□ -1.78
CLRN1P58418 AC011998.1-201ENST00000433403 117 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN1P58418 RPL26P6-201ENST00000440913 438 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN1P58418 DYNLL1P5-201ENST00000467158 270 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 RPL21P126-201ENST00000470049 478 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 AC008897.1-201ENST00000494006 347 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN1P58418 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.93□□□□□ -1.78
CLRN1P58418 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.93□□□□□ -1.78
CLRN1P58418 TBCAP3-201ENST00000512475 312 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.93□□□□□ -1.78
CLRN1P58418 GMPSP1-201ENST00000514075 579 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 Y_RNA.718-201ENST00000517110 102 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 RN7SKP258-201ENST00000517151 304 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN1P58418 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CLRN1P58418 AC100770.1-201ENST00000532310 322 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 AC135001.1-201ENST00000544546 283 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN1P58418 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN1P58418 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN1P58418 ATP1B3P1-201ENST00000605365 821 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 U2.17-201ENST00000611454 95 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 AC090971.5-201ENST00000621102 293 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.93□□□□□ -1.78
CLRN1P58418 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CLRN1P58418 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN1P58418 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN1P58418 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN1P58418 MAPK10-349ENST00000641767 3661 ntBASIC3.93□□□□□ -1.78
CLRN1P58418 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CLRN1P58418 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.93□□□□□ -1.78
CLRN1P58418 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN1P58418 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN1P58418 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.92□□□□□ -1.78
CLRN1P58418 AC074029.4-201ENST00000624796 1859 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.92□□□□□ -1.78
CLRN1P58418 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CLRN1P58418 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CLRN1P58418 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLRN1P58418 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 HSPA8P4-201ENST00000511877 1920 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 RNU6-715P-201ENST00000365204 103 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 RNU6-43P-201ENST00000384302 107 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 RNU6-393P-201ENST00000384475 107 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 AC074085.1-201ENST00000413598 418 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.92□□□□□ -1.78
CLRN1P58418 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.92□□□□□ -1.78
CLRN1P58418 AC244098.2-201ENST00000422068 99 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.92□□□□□ -1.78
CLRN1P58418 AL132765.1-201ENST00000434165 553 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.92□□□□□ -1.78
CLRN1P58418 BRK1P2-201ENST00000442875 223 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.92□□□□□ -1.78
CLRN1P58418 RPL5P30-201ENST00000465511 891 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 RPL23AP2-201ENST00000471227 466 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.92□□□□□ -1.78
CLRN1P58418 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.92□□□□□ -1.78
CLRN1P58418 SNORA31.3-201ENST00000516029 96 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 ERHP1-201ENST00000523006 310 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 AP000827.1-201ENST00000527814 258 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.92□□□□□ -1.78
CLRN1P58418 AC090115.3-201ENST00000553218 849 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.92□□□□□ -1.78
CLRN1P58418 AC020661.2-201ENST00000560114 134 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 MTCO3P13-201ENST00000577757 781 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 MIR4790-201ENST00000577799 79 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 SNORD84-203ENST00000584275 78 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.92□□□□□ -1.78
CLRN1P58418 AL627309.6-201ENST00000606857 840 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.92□□□□□ -1.78
CLRN1P58418 AC084781.2-201ENST00000615568 161 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 MTND5P42-201ENST00000637720 498 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 AC009812.4-201ENST00000569134 1805 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 AL592182.3-201ENST00000642132 3304 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 Z73965.1-201ENST00000623412 2297 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLRN1P58418 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CLRN1P58418 OR56B2P-202ENST00000641377 2453 ntBASIC3.92□□□□□ -1.78
CLRN1P58418 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLRN1P58418 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.91□□□□□ -1.78
CLRN1P58418 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 462 ms