Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NDUFB1P1-201ENST00000435191 180 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 MTCO3P45-201ENST00000443036 613 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 MTND1P1-201ENST00000445453 368 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC016696.1-201ENST00000446949 318 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC008481.1-201ENST00000463278 396 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC107401.1-201ENST00000503426 685 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC108078.1-201ENST00000508073 725 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN20P56880 SNORA31.22-201ENST00000517204 135 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC100870.1-201ENST00000522035 505 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 ERHP1-201ENST00000523006 310 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 OR5D17P-201ENST00000531492 978 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC087883.1-201ENST00000551882 391 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.3□□□□□ -1.88
CLDN20P56880 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 MIR3167-201ENST00000579623 85 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC006116.10-201ENST00000591836 581 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.3□□□□□ -1.88
CLDN20P56880 BNIP3P33-201ENST00000598912 569 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AL022154.1-201ENST00000604698 785 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AP000860.1-201ENST00000605250 559 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 MIR98-201ENST00000606724 119 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 AL136313.1-201ENST00000624804 202 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 AC099654.12-201ENST00000639868 649 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CLDN20P56880 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 GABPAP-201ENST00000419271 1356 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN20P56880 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN20P56880 OR5J1P-201ENST00000313544 939 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLDN20P56880 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN20P56880 U3.11-201ENST00000364476 212 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CLDN20P56880 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN20P56880 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLDN20P56880 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN20P56880 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN20P56880 GSTA9P-201ENST00000406231 611 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 RNU2-37P-201ENST00000410695 177 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 ATP5A1P2-201ENST00000412323 255 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AF274854.1-201ENST00000413236 615 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC245054.1-201ENST00000420944 258 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC091286.1-201ENST00000431233 461 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 VDAC1P3-201ENST00000434069 851 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 RPL26P6-201ENST00000440913 438 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC092473.1-201ENST00000441098 221 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN20P56880 RPS3AP46-201ENST00000448352 682 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AL049714.1-201ENST00000466686 347 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 RN7SL330P-201ENST00000469709 307 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AL049830.2-201ENST00000480072 201 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC004924.1-201ENST00000480160 781 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC108860.1-201ENST00000484521 383 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN20P56880 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN20P56880 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN20P56880 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN20P56880 AC114797.1-201ENST00000514003 728 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 RN7SKP244-201ENST00000516513 307 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN20P56880 AC022616.3-201ENST00000523940 148 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN20P56880 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN20P56880 AC123904.3-201ENST00000547218 814 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN20P56880 MIR4293-201ENST00000584305 78 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AF038458.1-201ENST00000588406 262 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN20P56880 AL606834.2-201ENST00000602954 668 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AP001330.4-201ENST00000604350 154 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AL021997.1-201ENST00000605757 193 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC004492.1-201ENST00000607036 742 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 AC103710.2-201ENST00000609912 942 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN20P56880 AC073534.2-201ENST00000620377 381 ntBASIC3.29□□□□□ -1.88
CLDN20P56880 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN20P56880 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN20P56880 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN20P56880 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms