Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.05□□□□□ -1.92
PEX3P56589 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PEX3P56589 AL161781.1-201ENST00000354277 403 ntBASIC3.05□□□□□ -1.92
PEX3P56589 Y_RNA.97-201ENST00000363094 102 ntBASIC3.05□□□□□ -1.92
PEX3P56589 RNU1-112P-201ENST00000364401 164 ntBASIC3.05□□□□□ -1.92
PEX3P56589 RNU6-769P-201ENST00000384407 104 ntBASIC3.05□□□□□ -1.92
PEX3P56589 MIR135A2-201ENST00000384854 100 ntBASIC3.05□□□□□ -1.92
PEX3P56589 RPL17P50-201ENST00000396131 546 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AL138827.1-201ENST00000402666 306 ntBASIC3.05□□□□□ -1.92
PEX3P56589 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.05□□□□□ -1.92
PEX3P56589 RPL7P10-201ENST00000417407 739 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.05□□□□□ -1.92
PEX3P56589 AL139281.1-201ENST00000422120 335 ntBASIC3.05□□□□□ -1.92
PEX3P56589 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PEX3P56589 MTND4P20-201ENST00000424125 869 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.05□□□□□ -1.92
PEX3P56589 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.05□□□□□ -1.92
PEX3P56589 AC079780.1-201ENST00000428259 207 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.05□□□□□ -1.92
PEX3P56589 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.05□□□□□ -1.92
PEX3P56589 HMGB1P12-201ENST00000438594 598 ntBASIC3.05□□□□□ -1.92
PEX3P56589 SETP11-201ENST00000473027 690 ntBASIC3.05□□□□□ -1.92
PEX3P56589 RPS27AP1-201ENST00000475545 471 ntBASIC3.05□□□□□ -1.92
PEX3P56589 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.05□□□□□ -1.92
PEX3P56589 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.05□□□□□ -1.92
PEX3P56589 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.05□□□□□ -1.92
PEX3P56589 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PEX3P56589 AC034159.1-201ENST00000513885 583 ntBASIC3.05□□□□□ -1.92
PEX3P56589 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.05□□□□□ -1.92
PEX3P56589 RNU6-759P-201ENST00000516740 103 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.05□□□□□ -1.92
PEX3P56589 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.05□□□□□ -1.92
PEX3P56589 AC007536.1-201ENST00000533382 349 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AC068587.4-201ENST00000533893 186 ntBASIC3.05□□□□□ -1.92
PEX3P56589 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.05□□□□□ -1.92
PEX3P56589 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.05□□□□□ -1.92
PEX3P56589 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.05□□□□□ -1.92
PEX3P56589 AC138761.3-201ENST00000579993 334 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.05□□□□□ -1.92
PEX3P56589 UBE2L4-201ENST00000587688 464 ntBASIC3.05□□□□□ -1.92
PEX3P56589 ELOCP29-201ENST00000588193 334 ntBASIC3.05□□□□□ -1.92
PEX3P56589 DUXAP11-201ENST00000603858 526 ntBASIC3.05□□□□□ -1.92
PEX3P56589 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PEX3P56589 AC097468.3-201ENST00000607956 456 ntBASIC3.05□□□□□ -1.92
PEX3P56589 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PEX3P56589 AL360181.4-201ENST00000621752 134 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AL158801.5-201ENST00000623123 465 ntBASIC3.05□□□□□ -1.92
PEX3P56589 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AC004925.1-201ENST00000624256 2706 ntBASIC3.05□□□□□ -1.92
PEX3P56589 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
PEX3P56589 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.04□□□□□ -1.92
PEX3P56589 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PEX3P56589 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
PEX3P56589 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
PEX3P56589 SNORA51.4-201ENST00000364993 124 ntBASIC3.04□□□□□ -1.92
PEX3P56589 SNORD116-8-201ENST00000384365 95 ntBASIC3.04□□□□□ -1.92
PEX3P56589 RNU6-253P-201ENST00000384730 105 ntBASIC3.04□□□□□ -1.92
PEX3P56589 MIR1305-201ENST00000408300 86 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.04□□□□□ -1.92
PEX3P56589 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.04□□□□□ -1.92
PEX3P56589 BX119904.4-201ENST00000424402 301 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AL390023.1-201ENST00000428836 262 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AL590103.1-201ENST00000434488 307 ntBASIC3.04□□□□□ -1.92
PEX3P56589 SETP8-201ENST00000435341 628 ntBASIC3.04□□□□□ -1.92
PEX3P56589 LARP1BP3-201ENST00000437229 869 ntBASIC3.04□□□□□ -1.92
PEX3P56589 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.04□□□□□ -1.92
PEX3P56589 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.04□□□□□ -1.92
PEX3P56589 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.04□□□□□ -1.92
PEX3P56589 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.04□□□□□ -1.92
PEX3P56589 BZW1P2-201ENST00000473537 826 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AC022447.3-201ENST00000506865 495 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AC117522.3-201ENST00000507974 584 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.04□□□□□ -1.92
PEX3P56589 RNU6-528P-201ENST00000516926 100 ntBASIC3.04□□□□□ -1.92
PEX3P56589 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PEX3P56589 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.04□□□□□ -1.92
PEX3P56589 AC007834.2-201ENST00000536310 343 ntBASIC3.04□□□□□ -1.92
PEX3P56589 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.04□□□□□ -1.92
PEX3P56589 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.04□□□□□ -1.92
PEX3P56589 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.04□□□□□ -1.92
PEX3P56589 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.04□□□□□ -1.92
PEX3P56589 MIR544B-201ENST00000582372 78 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AP001004.1-201ENST00000582468 324 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AC013444.2-201ENST00000603317 787 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AP000403.1-201ENST00000603349 851 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AC106028.5-201ENST00000610332 395 ntBASIC3.04□□□□□ -1.92
PEX3P56589 AC006378.2-201ENST00000623178 2476 ntBASIC3.04□□□□□ -1.92
PEX3P56589 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PEX3P56589 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PEX3P56589 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PEX3P56589 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
PEX3P56589 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PEX3P56589 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
PEX3P56589 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
PEX3P56589 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PEX3P56589 MIR26A1-201ENST00000362205 77 ntBASIC3.03□□□□□ -1.92
PEX3P56589 SNORA51.2-201ENST00000364595 132 ntBASIC3.03□□□□□ -1.92
PEX3P56589 RNU6-1207P-201ENST00000384343 107 ntBASIC3.03□□□□□ -1.92
PEX3P56589 MIR23A-201ENST00000385245 73 ntBASIC3.03□□□□□ -1.92
PEX3P56589 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms