Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.33□□□□□ -1.72
GFRA1P56159 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.33□□□□□ -1.72
GFRA1P56159 AC133555.2-201ENST00000550213 292 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 AL157871.3-201ENST00000557231 293 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 MIR1273C-201ENST00000578669 77 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 AL161798.1-201ENST00000604630 131 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 RNU6-85P-201ENST00000605989 107 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 AL355810.1-201ENST00000614629 552 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.33□□□□□ -1.72
GFRA1P56159 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.33□□□□□ -1.72
GFRA1P56159 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA1P56159 AC073869.10-201ENST00000642016 354 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
GFRA1P56159 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA1P56159 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.33□□□□□ -1.72
GFRA1P56159 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
GFRA1P56159 LINC01109-201ENST00000603837 3081 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GFRA1P56159 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
GFRA1P56159 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GFRA1P56159 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.32□□□□□ -1.72
GFRA1P56159 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GFRA1P56159 MFSD8-216ENST00000641147 4009 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
GFRA1P56159 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GFRA1P56159 RNU6-395P-201ENST00000365662 106 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GFRA1P56159 RNU6-1279P-201ENST00000383917 103 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 RNU6-890P-201ENST00000384121 107 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 Y_RNA.594-201ENST00000410373 140 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 RNU6-607P-201ENST00000411283 108 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 Z99755.1-201ENST00000414048 380 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AL353621.1-201ENST00000418219 243 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 RPS15AP6-201ENST00000420703 385 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.32□□□□□ -1.72
GFRA1P56159 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.32□□□□□ -1.72
GFRA1P56159 AC091390.3-201ENST00000426478 338 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 HMGB1P9-201ENST00000429856 646 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AC236972.1-201ENST00000433225 199 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AL645568.3-201ENST00000433683 316 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.32□□□□□ -1.72
GFRA1P56159 HMGN2P21-201ENST00000447764 270 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.32□□□□□ -1.72
GFRA1P56159 AC092436.3-201ENST00000511788 257 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.32□□□□□ -1.72
GFRA1P56159 RNU1-6P-201ENST00000516290 144 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 RN7SKP295-201ENST00000517264 153 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AC009902.1-201ENST00000519351 183 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.32□□□□□ -1.72
GFRA1P56159 HIGD1AP5-201ENST00000529959 259 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.32□□□□□ -1.72
GFRA1P56159 MIR3936-201ENST00000584304 110 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.32□□□□□ -1.72
GFRA1P56159 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.32□□□□□ -1.72
GFRA1P56159 AC136443.5-201ENST00000603741 370 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AL354984.3-201ENST00000604803 325 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.32□□□□□ -1.72
GFRA1P56159 AC011890.2-201ENST00000613393 294 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 AL161423.1-201ENST00000613700 262 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 MIR6853-201ENST00000619642 74 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.32□□□□□ -1.72
GFRA1P56159 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GFRA1P56159 MAPK10-349ENST00000641767 3661 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
GFRA1P56159 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
GFRA1P56159 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.32□□□□□ -1.72
GFRA1P56159 MAPK10-263ENST00000641052 4307 ntBASIC4.32□□□□□ -1.72
GFRA1P56159 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 AP001273.1-201ENST00000624493 3152 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
GFRA1P56159 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 EOGT-210ENST00000615922 1931 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 AC079741.1-201ENST00000321498 212 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 SNORA7.2-201ENST00000364446 145 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 Y_RNA.459-201ENST00000384251 102 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.31□□□□□ -1.72
GFRA1P56159 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
GFRA1P56159 RPL27AP8-201ENST00000424277 446 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AL590383.1-201ENST00000428602 75 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AC016831.4-201ENST00000438302 307 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AL035666.1-201ENST00000446195 348 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 BTF3P6-201ENST00000448054 499 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AC073264.2-201ENST00000448886 166 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 HMGB3P30-201ENST00000457863 606 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.31□□□□□ -1.72
GFRA1P56159 AC091868.1-201ENST00000508746 304 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.31□□□□□ -1.72
GFRA1P56159 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.31□□□□□ -1.72
GFRA1P56159 Y_RNA.670-201ENST00000516255 105 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 BNIP3P1-201ENST00000547295 580 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 AL110118.1-201ENST00000553543 400 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 RN7SL690P-201ENST00000582087 240 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 OR1M4P-201ENST00000589199 287 ntBASIC4.31□□□□□ -1.72
GFRA1P56159 MIR6820-201ENST00000611508 62 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms