Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SCARNA15.2-201ENST00000516409 127 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AP000857.1-201ENST00000532151 543 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.67□□□□□ -1.98
LIM2P55344 HPRT1P3-201ENST00000539521 576 ntBASIC2.67□□□□□ -1.98
LIM2P55344 HMGB1P14-201ENST00000557424 591 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.67□□□□□ -1.98
LIM2P55344 RPL23AP84-201ENST00000571193 464 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.67□□□□□ -1.98
LIM2P55344 AP000811.1-201ENST00000603803 651 ntBASIC2.67□□□□□ -1.98
LIM2P55344 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LIM2P55344 AC004067.1-201ENST00000608733 700 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AC135507.2-201ENST00000612443 309 ntBASIC2.67□□□□□ -1.98
LIM2P55344 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AP000676.4-201ENST00000624659 623 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AC008993.2-201ENST00000631744 806 ntBASIC2.67□□□□□ -1.98
LIM2P55344 AC092593.1-201ENST00000515413 1815 ntBASIC2.67□□□□□ -1.98
LIM2P55344 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIM2P55344 AC022336.2-201ENST00000568966 2538 ntBASIC2.66□□□□□ -1.98
LIM2P55344 RNU5E-8P-201ENST00000363502 116 ntBASIC2.66□□□□□ -1.98
LIM2P55344 RNU6-853P-201ENST00000364306 107 ntBASIC2.66□□□□□ -1.98
LIM2P55344 Y_RNA.302-201ENST00000364997 102 ntBASIC2.66□□□□□ -1.98
LIM2P55344 SNORA36C-201ENST00000384289 132 ntBASIC2.66□□□□□ -1.98
LIM2P55344 RNU6-114P-201ENST00000384704 105 ntBASIC2.66□□□□□ -1.98
LIM2P55344 MTND4P13-201ENST00000402078 1023 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AC096664.2-201ENST00000411843 406 ntBASIC2.66□□□□□ -1.98
LIM2P55344 BX119904.4-201ENST00000424402 301 ntBASIC2.66□□□□□ -1.98
LIM2P55344 OR4K11P-201ENST00000431829 904 ntBASIC2.66□□□□□ -1.98
LIM2P55344 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.66□□□□□ -1.98
LIM2P55344 AL135938.1-201ENST00000443141 297 ntBASIC2.66□□□□□ -1.98
LIM2P55344 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
LIM2P55344 AL591719.1-201ENST00000444669 744 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.66□□□□□ -1.98
LIM2P55344 RPL36AP33-201ENST00000450395 310 ntBASIC2.66□□□□□ -1.98
LIM2P55344 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.66□□□□□ -1.98
LIM2P55344 RNA5SP310-201ENST00000459084 116 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AL049714.1-201ENST00000466686 347 ntBASIC2.66□□□□□ -1.98
LIM2P55344 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.66□□□□□ -1.98
LIM2P55344 SNORD59.2-201ENST00000516873 68 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.66□□□□□ -1.98
LIM2P55344 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.66□□□□□ -1.98
LIM2P55344 AP004247.1-201ENST00000531556 1289 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.66□□□□□ -1.98
LIM2P55344 AC125611.2-201ENST00000551907 647 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AC034268.2-201ENST00000571784 482 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.66□□□□□ -1.98
LIM2P55344 AC093838.1-201ENST00000613014 469 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AL137790.1-201ENST00000634283 177 ntBASIC2.66□□□□□ -1.98
LIM2P55344 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
LIM2P55344 AC103988.1-201ENST00000566382 2177 ntBASIC2.66□□□□□ -1.98
LIM2P55344 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LIM2P55344 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.65□□□□□ -1.98
LIM2P55344 TPTE2P4-201ENST00000258589 1605 ntBASIC2.65□□□□□ -1.98
LIM2P55344 AC110774.1-201ENST00000623567 2018 ntBASIC2.65□□□□□ -1.99
LIM2P55344 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LIM2P55344 RNU6-1200P-201ENST00000384162 107 ntBASIC2.65□□□□□ -1.99
LIM2P55344 RNU6-253P-201ENST00000384730 105 ntBASIC2.65□□□□□ -1.99
LIM2P55344 RNU6-1197P-201ENST00000391183 107 ntBASIC2.65□□□□□ -1.99
LIM2P55344 SNORD88.1-201ENST00000408684 91 ntBASIC2.65□□□□□ -1.99
LIM2P55344 RNA5SP344-201ENST00000411081 104 ntBASIC2.65□□□□□ -1.99
LIM2P55344 RNU6-516P-201ENST00000411381 104 ntBASIC2.65□□□□□ -1.99
LIM2P55344 Z92545.1-201ENST00000411782 234 ntBASIC2.65□□□□□ -1.99
LIM2P55344 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.65□□□□□ -1.99
LIM2P55344 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.65□□□□□ -1.99
LIM2P55344 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AL645937.1-202ENST00000421799 937 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.65□□□□□ -1.99
LIM2P55344 LSM1P1-201ENST00000438629 273 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AL513043.1-201ENST00000439124 535 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.65□□□□□ -1.99
LIM2P55344 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.65□□□□□ -1.99
LIM2P55344 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.65□□□□□ -1.99
LIM2P55344 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.65□□□□□ -1.99
LIM2P55344 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.65□□□□□ -1.99
LIM2P55344 RPL30P14-201ENST00000482744 348 ntBASIC2.65□□□□□ -1.99
LIM2P55344 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.65□□□□□ -1.99
LIM2P55344 MTND1P22-201ENST00000510572 951 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.65□□□□□ -1.99
LIM2P55344 AC091826.1-201ENST00000514065 313 ntBASIC2.65□□□□□ -1.99
LIM2P55344 RNU6-678P-201ENST00000516832 109 ntBASIC2.65□□□□□ -1.99
LIM2P55344 RNU6-711P-201ENST00000517255 106 ntBASIC2.65□□□□□ -1.99
LIM2P55344 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.65□□□□□ -1.99
LIM2P55344 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.65□□□□□ -1.99
LIM2P55344 AC009094.1-201ENST00000564443 426 ntBASIC2.65□□□□□ -1.99
LIM2P55344 CYCSP39-201ENST00000565821 309 ntBASIC2.65□□□□□ -1.99
LIM2P55344 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.65□□□□□ -1.99
LIM2P55344 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.65□□□□□ -1.99
LIM2P55344 AC006504.3-201ENST00000586818 523 ntBASIC2.65□□□□□ -1.99
LIM2P55344 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.65□□□□□ -1.99
LIM2P55344 AC008751.2-201ENST00000597885 980 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AC018714.1-201ENST00000605028 208 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AC097468.3-201ENST00000607956 456 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AC099778.2-201ENST00000610904 211 ntBASIC2.65□□□□□ -1.99
LIM2P55344 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
LIM2P55344 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.65□□□□□ -1.99
LIM2P55344 AC008443.7-201ENST00000622195 246 ntBASIC2.65□□□□□ -1.99
LIM2P55344 AL356596.1-201ENST00000624230 379 ntBASIC2.65□□□□□ -1.99
LIM2P55344 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LIM2P55344 MAPK10-322ENST00000641485 4530 ntBASIC2.65□□□□□ -1.99
LIM2P55344 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LIM2P55344 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms