Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNRPGP9-201ENST00000456025 225 ntBASIC3.23□□□□□ -1.89
CDH13P55290 FTH1P2-201ENST00000466086 412 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AP002884.2-201ENST00000471647 395 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC010631.1-201ENST00000474150 156 ntBASIC3.23□□□□□ -1.89
CDH13P55290 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
CDH13P55290 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.23□□□□□ -1.89
CDH13P55290 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH13P55290 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH13P55290 PAICSP4-201ENST00000517543 1253 ntBASIC3.23□□□□□ -1.89
CDH13P55290 TRMT10BP1-201ENST00000519377 943 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC060788.1-201ENST00000521318 469 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC107934.1-201ENST00000522215 217 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH13P55290 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH13P55290 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH13P55290 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH13P55290 AL157394.1-201ENST00000562983 1224 ntBASIC3.23□□□□□ -1.89
CDH13P55290 MIR3118-1-201ENST00000581787 76 ntBASIC3.23□□□□□ -1.89
CDH13P55290 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CDH13P55290 MIR3922-201ENST00000585192 84 ntBASIC3.23□□□□□ -1.89
CDH13P55290 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH13P55290 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH13P55290 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH13P55290 U73023.1-201ENST00000603134 700 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC013553.2-201ENST00000604244 589 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC008962.1-201ENST00000605729 304 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AL391813.2-201ENST00000609113 322 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC099778.2-201ENST00000610904 211 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC073114.1-201ENST00000612027 490 ntBASIC3.23□□□□□ -1.89
CDH13P55290 uc_338.1-201ENST00000612113 180 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC025594.3-201ENST00000613068 790 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH13P55290 AL138880.2-201ENST00000616214 239 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AL356321.1-201ENST00000621360 228 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AC026422.1-201ENST00000623961 452 ntBASIC3.23□□□□□ -1.89
CDH13P55290 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH13P55290 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH13P55290 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH13P55290 TPTE2P4-201ENST00000258589 1605 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CDH13P55290 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH13P55290 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH13P55290 Y_RNA.77-201ENST00000362962 107 ntBASIC3.22□□□□□ -1.89
CDH13P55290 U3.4-201ENST00000363352 213 ntBASIC3.22□□□□□ -1.89
CDH13P55290 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH13P55290 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH13P55290 AL359634.1-202ENST00000404721 284 ntBASIC3.22□□□□□ -1.89
CDH13P55290 RN7SKP111-201ENST00000410349 271 ntBASIC3.22□□□□□ -1.89
CDH13P55290 USP9YP36-201ENST00000424581 829 ntBASIC3.22□□□□□ -1.89
CDH13P55290 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH13P55290 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH13P55290 MTND1P28-201ENST00000435623 950 ntBASIC3.22□□□□□ -1.89
CDH13P55290 CST9LP2-201ENST00000437612 320 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH13P55290 RPL21P23-201ENST00000446654 460 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC020550.1-201ENST00000447385 163 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH13P55290 RNU6-1256P-201ENST00000516539 103 ntBASIC3.22□□□□□ -1.89
CDH13P55290 SCARNA20.6-201ENST00000517251 106 ntBASIC3.22□□□□□ -1.89
CDH13P55290 OR5B10P-201ENST00000532869 642 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH13P55290 AC007115.1-201ENST00000546853 234 ntBASIC3.22□□□□□ -1.89
CDH13P55290 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.22□□□□□ -1.89
CDH13P55290 RPL21P5-201ENST00000554662 472 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC012414.6-201ENST00000568241 401 ntBASIC3.22□□□□□ -1.89
CDH13P55290 MIR548AB-201ENST00000584917 84 ntBASIC3.22□□□□□ -1.89
CDH13P55290 BNIP3P8-201ENST00000597863 560 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC010620.1-201ENST00000601088 1102 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AL162713.1-201ENST00000604480 262 ntBASIC3.22□□□□□ -1.89
CDH13P55290 OR2AS2P-201ENST00000606902 342 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH13P55290 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH13P55290 AL158063.1-201ENST00000615349 536 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH13P55290 Z69908.1-201ENST00000622603 247 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC027309.3-201ENST00000623419 351 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC091953.2-201ENST00000623979 160 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AL603839.4-201ENST00000624658 1005 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC099654.13-201ENST00000639774 207 ntBASIC3.22□□□□□ -1.89
CDH13P55290 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH13P55290 AL079305.1-201ENST00000623159 3008 ntBASIC3.22□□□□□ -1.89
CDH13P55290 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.89
CDH13P55290 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CDH13P55290 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH13P55290 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH13P55290 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDH13P55290 U3.11-201ENST00000364476 212 ntBASIC3.21□□□□□ -1.9
CDH13P55290 RNY3P13-201ENST00000365542 102 ntBASIC3.21□□□□□ -1.9
CDH13P55290 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH13P55290 SNORD116-9-201ENST00000384000 95 ntBASIC3.21□□□□□ -1.9
CDH13P55290 SNORD116-3-201ENST00000384287 95 ntBASIC3.21□□□□□ -1.9
CDH13P55290 SNORD116-7-201ENST00000384404 95 ntBASIC3.21□□□□□ -1.9
CDH13P55290 SNORD116-5-201ENST00000384462 95 ntBASIC3.21□□□□□ -1.9
CDH13P55290 MIR554-201ENST00000384874 96 ntBASIC3.21□□□□□ -1.9
CDH13P55290 MIR591-201ENST00000385290 95 ntBASIC3.21□□□□□ -1.9
CDH13P55290 MIR1302-8-201ENST00000408342 128 ntBASIC3.21□□□□□ -1.9
CDH13P55290 RNU6ATAC-201ENST00000408749 126 ntBASIC3.21□□□□□ -1.9
CDH13P55290 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH13P55290 RNU6-1077P-201ENST00000410506 102 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms