Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH12P55289 AC114755.5-201ENST00000447760 831 ntBASIC3.46□□□□□ -1.86
CDH12P55289 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH12P55289 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH12P55289 AC008481.1-201ENST00000463278 396 ntBASIC3.46□□□□□ -1.86
CDH12P55289 RPL31P58-201ENST00000469001 379 ntBASIC3.46□□□□□ -1.86
CDH12P55289 AC083798.1-201ENST00000472671 131 ntBASIC3.46□□□□□ -1.86
CDH12P55289 RPL36AP51-201ENST00000487216 318 ntBASIC3.46□□□□□ -1.86
CDH12P55289 Vault.1-201ENST00000516474 102 ntBASIC3.46□□□□□ -1.86
CDH12P55289 RNU7-51P-201ENST00000516560 62 ntBASIC3.46□□□□□ -1.86
CDH12P55289 SNORA31.22-201ENST00000517204 135 ntBASIC3.46□□□□□ -1.86
CDH12P55289 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH12P55289 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH12P55289 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH12P55289 OR4R1P-201ENST00000529879 463 ntBASIC3.46□□□□□ -1.86
CDH12P55289 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH12P55289 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH12P55289 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH12P55289 AP005205.1-201ENST00000563503 508 ntBASIC3.46□□□□□ -1.86
CDH12P55289 AC005255.1-201ENST00000593748 216 ntBASIC3.46□□□□□ -1.86
CDH12P55289 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH12P55289 AC244100.1-202ENST00000621554 382 ntBASIC3.46□□□□□ -1.86
CDH12P55289 AL365440.1-201ENST00000436135 2167 ntBASIC3.46□□□□□ -1.86
CDH12P55289 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH12P55289 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH12P55289 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH12P55289 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH12P55289 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH12P55289 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH12P55289 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CDH12P55289 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH12P55289 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CDH12P55289 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDH12P55289 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH12P55289 MIR372-201ENST00000362225 67 ntBASIC3.45□□□□□ -1.86
CDH12P55289 Y_RNA.303-201ENST00000364998 94 ntBASIC3.45□□□□□ -1.86
CDH12P55289 SNORA23-201ENST00000365128 182 ntBASIC3.45□□□□□ -1.86
CDH12P55289 RNU1-13P-201ENST00000384499 162 ntBASIC3.45□□□□□ -1.86
CDH12P55289 SNORA57.3-201ENST00000411095 141 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH12P55289 MTCO3P12-201ENST00000416718 547 ntBASIC3.45□□□□□ -1.86
CDH12P55289 MRPL50P2-201ENST00000416821 482 ntBASIC3.45□□□□□ -1.86
CDH12P55289 MTCO1P39-201ENST00000426148 480 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH12P55289 MED13P1-201ENST00000428342 171 ntBASIC3.45□□□□□ -1.86
CDH12P55289 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH12P55289 MTATP6P16-201ENST00000434543 526 ntBASIC3.45□□□□□ -1.86
CDH12P55289 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH12P55289 HMGB3P12-201ENST00000438745 556 ntBASIC3.45□□□□□ -1.86
CDH12P55289 BNIP3P2-201ENST00000441221 577 ntBASIC3.45□□□□□ -1.86
CDH12P55289 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH12P55289 DPPA3P1-201ENST00000448050 469 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC009220.1-201ENST00000451614 275 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH12P55289 AC022364.2-201ENST00000457963 554 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC010285.1-201ENST00000470580 392 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC007537.2-201ENST00000472093 511 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC010631.1-201ENST00000474150 156 ntBASIC3.45□□□□□ -1.86
CDH12P55289 RPS29P25-201ENST00000481709 171 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH12P55289 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH12P55289 SNORD27.1-201ENST00000516319 72 ntBASIC3.45□□□□□ -1.86
CDH12P55289 SNORA40.12-201ENST00000516329 111 ntBASIC3.45□□□□□ -1.86
CDH12P55289 RNA5SP309-201ENST00000516670 106 ntBASIC3.45□□□□□ -1.86
CDH12P55289 RNU6-835P-201ENST00000516974 104 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH12P55289 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH12P55289 AC100870.1-201ENST00000522035 505 ntBASIC3.45□□□□□ -1.86
CDH12P55289 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH12P55289 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH12P55289 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH12P55289 HMGB1P6-201ENST00000569046 646 ntBASIC3.45□□□□□ -1.86
CDH12P55289 MIR4738-201ENST00000579134 87 ntBASIC3.45□□□□□ -1.86
CDH12P55289 SNORA62.6-201ENST00000606322 83 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC008536.2-201ENST00000607284 349 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC004067.1-201ENST00000608733 700 ntBASIC3.45□□□□□ -1.86
CDH12P55289 RNVU1-4-201ENST00000612985 164 ntBASIC3.45□□□□□ -1.86
CDH12P55289 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH12P55289 SNHG22-203ENST00000617833 660 ntBASIC3.45□□□□□ -1.86
CDH12P55289 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CDH12P55289 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.45□□□□□ -1.86
CDH12P55289 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH12P55289 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH12P55289 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH12P55289 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH12P55289 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH12P55289 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH12P55289 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH12P55289 EXOC5P1-201ENST00000510543 1969 ntBASIC3.44□□□□□ -1.86
CDH12P55289 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH12P55289 SPRR2C-201ENST00000290702 219 ntBASIC3.44□□□□□ -1.86
CDH12P55289 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CDH12P55289 RNU6-1284P-201ENST00000363701 100 ntBASIC3.44□□□□□ -1.86
CDH12P55289 RNU6-188P-201ENST00000364207 107 ntBASIC3.44□□□□□ -1.86
CDH12P55289 RNU6-213P-201ENST00000384051 104 ntBASIC3.44□□□□□ -1.86
CDH12P55289 U1.1-201ENST00000384101 164 ntBASIC3.44□□□□□ -1.86
CDH12P55289 Y_RNA.573-201ENST00000384763 105 ntBASIC3.44□□□□□ -1.86
CDH12P55289 RNA5SP424-201ENST00000390988 115 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms