Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AC002400.1-201ENST00000569310 726 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 ISCA1P3-201ENST00000577104 373 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AC083760.1-201ENST00000589621 670 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCS2P54868 CTSLP2-204ENST00000629029 392 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGCS2P54868 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
HMGCS2P54868 ZNF826P-207ENST00000622273 1910 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCS2P54868 RNU6-433P-201ENST00000363216 104 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 RNU6-343P-201ENST00000364709 104 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 SNORA36C-201ENST00000384289 132 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 RNU6-952P-201ENST00000391164 108 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 AL591034.1-201ENST00000407447 340 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 TPMTP2-201ENST00000414372 726 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCS2P54868 ZYG11AP1-201ENST00000430329 837 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS2P54868 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 RPL23AP74-201ENST00000437246 471 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 MTND4P6-201ENST00000438297 472 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS2P54868 RPL23AP31-201ENST00000456160 467 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 RPS23P3-201ENST00000470993 430 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS2P54868 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS2P54868 IGHV3-76-201ENST00000522465 295 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 MTND2P38-201ENST00000522536 667 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCS2P54868 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCS2P54868 AC135628.1-201ENST00000568867 534 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 AL596327.1-201ENST00000603629 213 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCS2P54868 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
HMGCS2P54868 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCS2P54868 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HMGCS2P54868 AL022578.1-201ENST00000439330 1433 ntBASIC3.02□□□□□ -1.93
HMGCS2P54868 DDX43P2-201ENST00000604753 1354 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS2P54868 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS2P54868 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCS2P54868 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS2P54868 U8.2-201ENST00000363156 134 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCS2P54868 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS2P54868 RNU4-72P-201ENST00000410754 173 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCS2P54868 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC007742.1-201ENST00000425789 329 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 PSMA6P3-201ENST00000428242 164 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS2P54868 EZH2P1-201ENST00000431167 291 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 ELOCP26-201ENST00000436067 329 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 AL445567.1-201ENST00000439121 144 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 RPL17P49-201ENST00000443728 411 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCS2P54868 HMGB1P25-201ENST00000468402 607 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 LINC00888-204ENST00000487386 421 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS2P54868 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS2P54868 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC105914.1-201ENST00000511798 226 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 RN7SKP24-201ENST00000515888 284 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 RNU6-150P-201ENST00000516237 95 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 AC243972.3-201ENST00000539655 198 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS2P54868 XIAPP1-201ENST00000603162 600 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 AC004009.2-201ENST00000623016 728 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 AC079228.1-201ENST00000624774 1049 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC007671.2-201ENST00000637344 619 ntBASIC3.01□□□□□ -1.93
HMGCS2P54868 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS2P54868 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS2P54868 AC244517.1-201ENST00000606030 2086 ntBASIC3□□□□□ -1.93
HMGCS2P54868 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3□□□□□ -1.93
HMGCS2P54868 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGCS2P54868 Y_RNA.169-201ENST00000363745 96 ntBASIC3□□□□□ -1.93
HMGCS2P54868 RNU6-777P-201ENST00000364265 104 ntBASIC3□□□□□ -1.93
HMGCS2P54868 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCS2P54868 MIR518C-201ENST00000384822 101 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms