Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.74□□□□□ -2.13
GTF2A1P52655 AL162233.1-201ENST00000620014 944 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AC244517.12-201ENST00000623581 663 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.74□□□□□ -2.13
GTF2A1P52655 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.74□□□□□ -2.13
GTF2A1P52655 AP003399.1-201ENST00000637534 361 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
GTF2A1P52655 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
GTF2A1P52655 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
GTF2A1P52655 RNU6-730P-201ENST00000383954 104 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC019129.1-201ENST00000403786 261 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 VTA1P1-201ENST00000414044 866 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC074117.2-201ENST00000417130 397 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 EIF1AXP1-201ENST00000419267 435 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC009237.2-201ENST00000421358 284 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.73□□□□□ -2.13
GTF2A1P52655 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.73□□□□□ -2.13
GTF2A1P52655 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.73□□□□□ -2.13
GTF2A1P52655 AL512661.1-201ENST00000434586 1253 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC104073.1-201ENST00000451988 151 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 MTCO3P11-201ENST00000455103 774 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 RPS20P24-201ENST00000457473 361 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 RPL23AP63-201ENST00000498752 471 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.73□□□□□ -2.13
GTF2A1P52655 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.73□□□□□ -2.13
GTF2A1P52655 HMGB1P47-201ENST00000511281 589 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.73□□□□□ -2.13
GTF2A1P52655 AC138473.1-201ENST00000605717 526 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC004775.1-201ENST00000607389 753 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.73□□□□□ -2.13
GTF2A1P52655 AC007038.2-201ENST00000608095 740 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AC091304.6-201ENST00000619761 202 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 MIR6873-201ENST00000622788 63 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 AL109659.3-201ENST00000624985 950 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
GTF2A1P52655 AL136360.1-201ENST00000503377 1900 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.73□□□□□ -2.13
GTF2A1P52655 MTND5P10-201ENST00000603719 1809 ntBASIC1.73□□□□□ -2.13
GTF2A1P52655 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.72□□□□□ -2.13
GTF2A1P52655 SNORA67.3-201ENST00000384366 140 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 RNU2-20P-201ENST00000410425 191 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 RNU4-53P-201ENST00000410828 140 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 POLHP1-201ENST00000411806 470 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 VN1R36P-201ENST00000414936 291 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.72□□□□□ -2.13
GTF2A1P52655 LINC01347-201ENST00000417964 355 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 MTND4LP10-201ENST00000435146 291 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.72□□□□□ -2.13
GTF2A1P52655 Z80107.1-201ENST00000436830 412 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.72□□□□□ -2.13
GTF2A1P52655 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.72□□□□□ -2.13
GTF2A1P52655 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.72□□□□□ -2.13
GTF2A1P52655 AL049714.1-201ENST00000466686 347 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 AC068781.1-201ENST00000488231 618 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.72□□□□□ -2.13
GTF2A1P52655 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.72□□□□□ -2.13
GTF2A1P52655 AC026464.5-201ENST00000562497 722 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 MIR6798-201ENST00000612887 67 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
GTF2A1P52655 ZNF702P-202ENST00000434269 1966 ntBASIC1.72□□□□□ -2.13
GTF2A1P52655 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.71□□□□□ -2.14
GTF2A1P52655 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.71□□□□□ -2.14
GTF2A1P52655 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
GTF2A1P52655 RNU6-444P-201ENST00000383988 108 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 RNU6-19P-201ENST00000384718 107 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 RNU6-1328P-201ENST00000410938 106 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 RPS7P9-201ENST00000414704 586 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.71□□□□□ -2.14
GTF2A1P52655 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.71□□□□□ -2.14
GTF2A1P52655 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.71□□□□□ -2.14
GTF2A1P52655 OR10R1P-201ENST00000441524 1141 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 MTCO3P17-201ENST00000443775 513 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 RPL23AP6-201ENST00000446637 472 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 RNU6-420P-201ENST00000458780 107 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AC005410.1-202ENST00000460347 485 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AC079203.1-201ENST00000487972 404 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.71□□□□□ -2.14
GTF2A1P52655 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
GTF2A1P52655 SUMO2P6-201ENST00000505273 288 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 SLC25A15P5-201ENST00000508033 253 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AC112518.2-201ENST00000508565 425 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
GTF2A1P52655 AP001317.1-201ENST00000531194 960 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AC074050.1-201ENST00000563247 211 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AC009097.3-201ENST00000563557 1018 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AC021749.1-201ENST00000604322 607 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 SUMO2P14-201ENST00000604488 293 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 AC007998.5-201ENST00000622938 237 ntBASIC1.71□□□□□ -2.14
GTF2A1P52655 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
GTF2A1P52655 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
GTF2A1P52655 RNU1-73P-201ENST00000383971 164 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 RNU6-1035P-201ENST00000384477 107 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 SNORA64-201ENST00000384674 134 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 RN7SKP32-201ENST00000410167 303 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 AC099548.1-201ENST00000421443 426 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 RAB11AP1-201ENST00000442978 646 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 SNORD121B-201ENST00000458838 81 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 AC025181.1-201ENST00000477507 416 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms