Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC107294.1-201ENST00000609524 467 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AL365204.3-201ENST00000612448 685 ntBASIC3.99□□□□□ -1.77
NEK3P51956 Z99129.1-201ENST00000612510 255 ntBASIC3.99□□□□□ -1.77
NEK3P51956 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.99□□□□□ -1.77
NEK3P51956 PLCE1P1-201ENST00000622094 305 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AC138649.3-201ENST00000622154 254 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AL354798.1-201ENST00000622505 329 ntBASIC3.99□□□□□ -1.77
NEK3P51956 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.99□□□□□ -1.77
NEK3P51956 OR5H6-203ENST00000642105 978 ntBASIC3.99□□□□□ -1.77
NEK3P51956 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.99□□□□□ -1.77
NEK3P51956 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK3P51956 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEK3P51956 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK3P51956 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK3P51956 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NEK3P51956 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NEK3P51956 RNA5SP97-201ENST00000365006 84 ntBASIC3.98□□□□□ -1.77
NEK3P51956 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK3P51956 RNU6-701P-201ENST00000384059 107 ntBASIC3.98□□□□□ -1.77
NEK3P51956 SOD2P1-201ENST00000396543 562 ntBASIC3.98□□□□□ -1.77
NEK3P51956 RNU6-1077P-201ENST00000410506 102 ntBASIC3.98□□□□□ -1.77
NEK3P51956 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NEK3P51956 AC007390.1-201ENST00000415722 356 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AC092573.2-201ENST00000434546 243 ntBASIC3.98□□□□□ -1.77
NEK3P51956 BNIP3P2-201ENST00000441221 577 ntBASIC3.98□□□□□ -1.77
NEK3P51956 PIGFP3-201ENST00000441918 722 ntBASIC3.98□□□□□ -1.77
NEK3P51956 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK3P51956 AC079448.1-201ENST00000449377 373 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK3P51956 AC012181.1-201ENST00000479895 423 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK3P51956 AC105252.1-201ENST00000503089 286 ntBASIC3.98□□□□□ -1.77
NEK3P51956 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
NEK3P51956 AC090572.1-201ENST00000519251 160 ntBASIC3.98□□□□□ -1.77
NEK3P51956 HMGB1P41-201ENST00000520234 440 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AP003392.2-201ENST00000527269 208 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK3P51956 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK3P51956 AC011602.1-201ENST00000546484 331 ntBASIC3.98□□□□□ -1.77
NEK3P51956 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK3P51956 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.98□□□□□ -1.77
NEK3P51956 AL845331.3-202ENST00000562856 261 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AGGF1P4-201ENST00000568249 801 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AC034105.4-201ENST00000568304 277 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AC073534.2-201ENST00000620377 381 ntBASIC3.98□□□□□ -1.77
NEK3P51956 AC004777.1-201ENST00000624317 287 ntBASIC3.98□□□□□ -1.77
NEK3P51956 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK3P51956 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK3P51956 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK3P51956 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
NEK3P51956 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
NEK3P51956 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.98□□□□□ -1.77
NEK3P51956 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.98□□□□□ -1.77
NEK3P51956 TNPO1P3-201ENST00000436471 2662 ntBASIC3.98□□□□□ -1.77
NEK3P51956 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK3P51956 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NEK3P51956 AC092447.7-201ENST00000422212 1621 ntBASIC3.97□□□□□ -1.77
NEK3P51956 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEK3P51956 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK3P51956 RNU2-39P-201ENST00000410604 198 ntBASIC3.97□□□□□ -1.77
NEK3P51956 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK3P51956 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.97□□□□□ -1.77
NEK3P51956 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK3P51956 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEK3P51956 AC083863.1-201ENST00000438811 231 ntBASIC3.97□□□□□ -1.77
NEK3P51956 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK3P51956 AC007182.2-201ENST00000489251 402 ntBASIC3.97□□□□□ -1.77
NEK3P51956 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK3P51956 AC091133.4-201ENST00000511142 308 ntBASIC3.97□□□□□ -1.77
NEK3P51956 AC023632.4-201ENST00000517783 191 ntBASIC3.97□□□□□ -1.77
NEK3P51956 CYCSP30-201ENST00000546447 172 ntBASIC3.97□□□□□ -1.77
NEK3P51956 YPEL5P3-201ENST00000547227 352 ntBASIC3.97□□□□□ -1.77
NEK3P51956 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK3P51956 AMZ2P1-203ENST00000565833 850 ntBASIC3.97□□□□□ -1.77
NEK3P51956 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.97□□□□□ -1.77
NEK3P51956 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.97□□□□□ -1.77
NEK3P51956 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK3P51956 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
NEK3P51956 XIST_intron.1-201ENST00000619444 68 ntBASIC3.97□□□□□ -1.77
NEK3P51956 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.97□□□□□ -1.77
NEK3P51956 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
NEK3P51956 AC007256.1-201ENST00000392253 2765 ntBASIC3.97□□□□□ -1.77
NEK3P51956 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NEK3P51956 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
NEK3P51956 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NEK3P51956 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NEK3P51956 RPS4XP5-202ENST00000449995 1334 ntBASIC3.96□□□□□ -1.77
NEK3P51956 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEK3P51956 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEK3P51956 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NEK3P51956 MAPK10-373ENST00000641983 6772 ntBASIC3.96□□□□□ -1.78
NEK3P51956 SMIM11P1-201ENST00000369586 178 ntBASIC3.96□□□□□ -1.78
NEK3P51956 MIR591-201ENST00000385290 95 ntBASIC3.96□□□□□ -1.78
NEK3P51956 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.96□□□□□ -1.78
NEK3P51956 RNU2-66P-201ENST00000410650 161 ntBASIC3.96□□□□□ -1.78
NEK3P51956 RPL21P109-201ENST00000422213 475 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AC010975.2-201ENST00000427781 588 ntBASIC3.96□□□□□ -1.78
NEK3P51956 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK3P51956 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK3P51956 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms