Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.63□□□□□ -1.35
PRIM1P49642 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.63□□□□□ -1.35
PRIM1P49642 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 AC074050.1-201ENST00000563247 211 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 AC136624.4-201ENST00000573044 370 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.63□□□□□ -1.35
PRIM1P49642 MIR548AC-201ENST00000585049 88 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 AP005432.2-201ENST00000608162 586 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 uc_338.7-201ENST00000621834 124 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PRIM1P49642 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.63□□□□□ -1.35
PRIM1P49642 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.63□□□□□ -1.35
PRIM1P49642 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
PRIM1P49642 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
PRIM1P49642 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRIM1P49642 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PRIM1P49642 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRIM1P49642 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PRIM1P49642 Y_RNA.533-201ENST00000384596 114 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 RN7SKP100-201ENST00000411258 284 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.62□□□□□ -1.35
PRIM1P49642 AC239809.1-201ENST00000450470 217 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.62□□□□□ -1.35
PRIM1P49642 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.62□□□□□ -1.35
PRIM1P49642 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.62□□□□□ -1.35
PRIM1P49642 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 TRAV32-201ENST00000553993 340 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 MIR5696-201ENST00000578474 85 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 U2.14-201ENST00000615943 113 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.62□□□□□ -1.35
PRIM1P49642 AC020633.1-201ENST00000468439 2247 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.62□□□□□ -1.35
PRIM1P49642 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.62□□□□□ -1.35
PRIM1P49642 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRIM1P49642 PROS2P-201ENST00000474651 1951 ntBASIC6.62□□□□□ -1.35
PRIM1P49642 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.61□□□□□ -1.35
PRIM1P49642 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRIM1P49642 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PRIM1P49642 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRIM1P49642 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
PRIM1P49642 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRIM1P49642 AL159987.2-201ENST00000432754 307 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.61□□□□□ -1.35
PRIM1P49642 U8.21-201ENST00000459536 136 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 AC010326.1-201ENST00000462726 602 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 SNORA31.3-201ENST00000516029 96 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 Y_RNA.683-201ENST00000516508 93 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC6.61□□□□□ -1.35
PRIM1P49642 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.61□□□□□ -1.35
PRIM1P49642 MIR4300-201ENST00000581016 96 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 AL158827.2-201ENST00000602494 330 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 AC072026.1-201ENST00000605023 201 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 MIR15A-201ENST00000607334 83 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 AL691447.3-201ENST00000635020 330 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
PRIM1P49642 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.61□□□□□ -1.35
PRIM1P49642 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
PRIM1P49642 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PRIM1P49642 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 AC083899.1-201ENST00000454465 3819 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 AC009643.2-201ENST00000603543 1448 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
PRIM1P49642 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 MTND5P9-201ENST00000503854 1755 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 RNU6-740P-201ENST00000364734 105 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.6□□□□□ -1.35
PRIM1P49642 RNU1-74P-201ENST00000384108 171 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 MIR215-201ENST00000384858 110 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 Y_RNA.581-201ENST00000391017 97 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 ENSAP1-201ENST00000392855 326 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 HSPE1P8-201ENST00000406997 288 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 U3.35-201ENST00000408405 208 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC6.6□□□□□ -1.35
PRIM1P49642 EIF1P2-201ENST00000428233 350 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.6□□□□□ -1.35
PRIM1P49642 ISCUP1-201ENST00000454451 448 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 RPS24P16-201ENST00000497294 392 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 AL359273.1-201ENST00000510918 627 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.6□□□□□ -1.35
PRIM1P49642 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.6□□□□□ -1.35
PRIM1P49642 AC087441.2-201ENST00000529141 262 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.6□□□□□ -1.35
PRIM1P49642 AL442163.3-201ENST00000554110 156 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 AL359219.2-201ENST00000555184 348 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 Y_RNA.772-201ENST00000606692 102 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 MIR3976-201ENST00000606807 139 ntBASIC6.6□□□□□ -1.35
PRIM1P49642 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
PRIM1P49642 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.6□□□□□ -1.35
PRIM1P49642 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.6□□□□□ -1.35
PRIM1P49642 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRIM1P49642 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms