Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
LHX1P48742 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LHX1P48742 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX1P48742 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
LHX1P48742 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
LHX1P48742 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.25□□□□□ -1.89
LHX1P48742 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LHX1P48742 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.25□□□□□ -1.89
LHX1P48742 AC091152.2-201ENST00000591628 2569 ntBASIC3.25□□□□□ -1.89
LHX1P48742 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.25□□□□□ -1.89
LHX1P48742 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX1P48742 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX1P48742 RNU5A-1-201ENST00000362698 116 ntBASIC3.25□□□□□ -1.89
LHX1P48742 CCNG1P1-201ENST00000406783 885 ntBASIC3.25□□□□□ -1.89
LHX1P48742 RPL27AP8-201ENST00000424277 446 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.25□□□□□ -1.89
LHX1P48742 FTH1P1-201ENST00000437933 532 ntBASIC3.25□□□□□ -1.89
LHX1P48742 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AC140076.1-201ENST00000449897 361 ntBASIC3.25□□□□□ -1.89
LHX1P48742 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.25□□□□□ -1.89
LHX1P48742 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LHX1P48742 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.25□□□□□ -1.89
LHX1P48742 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.25□□□□□ -1.89
LHX1P48742 AC011825.1-201ENST00000484967 388 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AC109486.1-201ENST00000486833 374 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AC135721.1-201ENST00000497954 479 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AC010486.3-201ENST00000511602 785 ntBASIC3.25□□□□□ -1.89
LHX1P48742 SNORA70.16-201ENST00000516390 95 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AC009812.2-201ENST00000517657 457 ntBASIC3.25□□□□□ -1.89
LHX1P48742 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.25□□□□□ -1.89
LHX1P48742 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LHX1P48742 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.25□□□□□ -1.89
LHX1P48742 AP005205.1-201ENST00000563503 508 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
LHX1P48742 COX6CP3-201ENST00000580869 223 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.25□□□□□ -1.89
LHX1P48742 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.25□□□□□ -1.89
LHX1P48742 AC012360.2-201ENST00000609349 391 ntBASIC3.25□□□□□ -1.89
LHX1P48742 OR10AB1P-201ENST00000609613 938 ntBASIC3.25□□□□□ -1.89
LHX1P48742 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.25□□□□□ -1.89
LHX1P48742 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AL603758.1-201ENST00000618654 241 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AC012150.2-201ENST00000621300 544 ntBASIC3.25□□□□□ -1.89
LHX1P48742 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.25□□□□□ -1.89
LHX1P48742 MIR3974-201ENST00000637126 96 ntBASIC3.25□□□□□ -1.89
LHX1P48742 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
LHX1P48742 AC118273.1-201ENST00000525324 3006 ntBASIC3.25□□□□□ -1.89
LHX1P48742 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LHX1P48742 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX1P48742 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.25□□□□□ -1.89
LHX1P48742 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.25□□□□□ -1.89
LHX1P48742 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX1P48742 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LHX1P48742 AC000403.1-201ENST00000613696 3585 ntBASIC3.25□□□□□ -1.89
LHX1P48742 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LHX1P48742 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.24□□□□□ -1.89
LHX1P48742 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LHX1P48742 GNG5P1-201ENST00000255500 204 ntBASIC3.24□□□□□ -1.89
LHX1P48742 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 MT-TH-201ENST00000387441 69 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AL591034.1-201ENST00000407447 340 ntBASIC3.24□□□□□ -1.89
LHX1P48742 RPL31P12-201ENST00000422587 358 ntBASIC3.24□□□□□ -1.89
LHX1P48742 RPL35AP12-201ENST00000425362 338 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.24□□□□□ -1.89
LHX1P48742 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.24□□□□□ -1.89
LHX1P48742 AC118469.1-201ENST00000442943 488 ntBASIC3.24□□□□□ -1.89
LHX1P48742 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.24□□□□□ -1.89
LHX1P48742 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.24□□□□□ -1.89
LHX1P48742 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AP000797.1-201ENST00000478870 387 ntBASIC3.24□□□□□ -1.89
LHX1P48742 HSPE1P6-201ENST00000479457 291 ntBASIC3.24□□□□□ -1.89
LHX1P48742 RPL23AP41-201ENST00000484754 458 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AC055855.1-201ENST00000489563 579 ntBASIC3.24□□□□□ -1.89
LHX1P48742 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LHX1P48742 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 AL359273.1-201ENST00000510918 627 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.24□□□□□ -1.89
LHX1P48742 RNU6-1003P-201ENST00000517099 105 ntBASIC3.24□□□□□ -1.89
LHX1P48742 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
LHX1P48742 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.24□□□□□ -1.89
LHX1P48742 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.24□□□□□ -1.89
LHX1P48742 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.24□□□□□ -1.89
LHX1P48742 MIR3921-201ENST00000577308 85 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.24□□□□□ -1.89
LHX1P48742 AC083760.1-201ENST00000589621 670 ntBASIC3.24□□□□□ -1.89
LHX1P48742 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AL031775.1-201ENST00000607014 887 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AC004908.2-201ENST00000609090 574 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AC135507.2-201ENST00000612443 309 ntBASIC3.24□□□□□ -1.89
LHX1P48742 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.24□□□□□ -1.89
LHX1P48742 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LHX1P48742 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.24□□□□□ -1.89
LHX1P48742 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LHX1P48742 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms