Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX1P47902 AC090877.1-201ENST00000561418 344 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AL590229.1-201ENST00000603497 542 ntBASIC2.95□□□□□ -1.94
CDX1P47902 OR2AS2P-201ENST00000606902 342 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX1P47902 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX1P47902 FRG1KP-201ENST00000623592 341 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AC073308.1-201ENST00000623696 305 ntBASIC2.95□□□□□ -1.94
CDX1P47902 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CDX1P47902 MTND1P37-201ENST00000636562 264 ntBASIC2.95□□□□□ -1.94
CDX1P47902 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX1P47902 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX1P47902 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDX1P47902 AC073073.2-201ENST00000609827 2578 ntBASIC2.94□□□□□ -1.94
CDX1P47902 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX1P47902 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX1P47902 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CDX1P47902 RNA5SP383-201ENST00000362934 120 ntBASIC2.94□□□□□ -1.94
CDX1P47902 RNU6-1035P-201ENST00000384477 107 ntBASIC2.94□□□□□ -1.94
CDX1P47902 RNY3P10-201ENST00000384764 102 ntBASIC2.94□□□□□ -1.94
CDX1P47902 RNU2-33P-201ENST00000410344 192 ntBASIC2.94□□□□□ -1.94
CDX1P47902 SDCBPP3-201ENST00000419629 891 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC069157.1-201ENST00000421749 137 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC092047.1-201ENST00000424997 240 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.94□□□□□ -1.94
CDX1P47902 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX1P47902 RPL21P40-201ENST00000428586 483 ntBASIC2.94□□□□□ -1.94
CDX1P47902 DDX3P2-201ENST00000446138 111 ntBASIC2.94□□□□□ -1.94
CDX1P47902 PDSS1P2-201ENST00000449397 678 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC006480.1-201ENST00000449887 378 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.94□□□□□ -1.94
CDX1P47902 MTND4LP22-201ENST00000508209 276 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.94□□□□□ -1.94
CDX1P47902 RNU6-927P-201ENST00000516199 100 ntBASIC2.94□□□□□ -1.94
CDX1P47902 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.94□□□□□ -1.94
CDX1P47902 RN7SKP258-201ENST00000517151 304 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX1P47902 AC060788.1-201ENST00000521318 469 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC011979.2-201ENST00000527568 352 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX1P47902 RPL21P5-201ENST00000554662 472 ntBASIC2.94□□□□□ -1.94
CDX1P47902 MTCO3P24-201ENST00000572729 782 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX1P47902 MIR4506-201ENST00000584693 77 ntBASIC2.94□□□□□ -1.94
CDX1P47902 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX1P47902 GLUD1P4-201ENST00000590914 418 ntBASIC2.94□□□□□ -1.94
CDX1P47902 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX1P47902 CKS1BP3-201ENST00000600888 237 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AL161729.4-201ENST00000604650 476 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC073114.1-201ENST00000612027 490 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AL121772.2-201ENST00000614331 297 ntBASIC2.94□□□□□ -1.94
CDX1P47902 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC108479.2-201ENST00000617314 601 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC092140.2-201ENST00000618027 521 ntBASIC2.94□□□□□ -1.94
CDX1P47902 AC004972.1-201ENST00000623934 2209 ntBASIC2.94□□□□□ -1.94
CDX1P47902 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.94□□□□□ -1.94
CDX1P47902 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX1P47902 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX1P47902 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.93□□□□□ -1.94
CDX1P47902 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDX1P47902 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX1P47902 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDX1P47902 U3.4-201ENST00000363352 213 ntBASIC2.93□□□□□ -1.94
CDX1P47902 RNU6-701P-201ENST00000384059 107 ntBASIC2.93□□□□□ -1.94
CDX1P47902 MIR23B-201ENST00000384832 97 ntBASIC2.93□□□□□ -1.94
CDX1P47902 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDX1P47902 NDUFS5P1-201ENST00000405668 289 ntBASIC2.93□□□□□ -1.94
CDX1P47902 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDX1P47902 RAB9AP3-201ENST00000412737 573 ntBASIC2.93□□□□□ -1.94
CDX1P47902 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX1P47902 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX1P47902 RAC1P6-201ENST00000423911 575 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AC006989.1-201ENST00000427212 131 ntBASIC2.93□□□□□ -1.94
CDX1P47902 HMGB1P27-201ENST00000431429 603 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX1P47902 BNIP3P2-201ENST00000441221 577 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.93□□□□□ -1.94
CDX1P47902 COX6CP2-201ENST00000444980 225 ntBASIC2.93□□□□□ -1.94
CDX1P47902 RAB9AP1-201ENST00000449393 573 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX1P47902 AC092798.1-201ENST00000458542 409 ntBASIC2.93□□□□□ -1.94
CDX1P47902 RBM43P1-201ENST00000476891 1081 ntBASIC2.93□□□□□ -1.94
CDX1P47902 MTND1P3-201ENST00000484956 952 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AC010587.1-201ENST00000505809 469 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX1P47902 RNA5SP385-201ENST00000515947 110 ntBASIC2.93□□□□□ -1.94
CDX1P47902 RNU2-10P-201ENST00000516375 211 ntBASIC2.93□□□□□ -1.94
CDX1P47902 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDX1P47902 TRMT10BP1-201ENST00000519377 943 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AP003467.2-201ENST00000520175 319 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX1P47902 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX1P47902 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX1P47902 AMZ2P1-203ENST00000565833 850 ntBASIC2.93□□□□□ -1.94
CDX1P47902 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDX1P47902 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX1P47902 AC009977.1-201ENST00000586015 570 ntBASIC2.93□□□□□ -1.94
CDX1P47902 HMGN1P30-201ENST00000589286 268 ntBASIC2.93□□□□□ -1.94
CDX1P47902 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms