Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC139769.1-204ENST00000472297 1931 ntBASIC4.74□□□□□ -1.65
CCNFP41002 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CCNFP41002 RNU6-1309P-201ENST00000363305 108 ntBASIC4.74□□□□□ -1.65
CCNFP41002 SNORA75B-201ENST00000384053 137 ntBASIC4.74□□□□□ -1.65
CCNFP41002 AC009237.10-201ENST00000414112 510 ntBASIC4.74□□□□□ -1.65
CCNFP41002 COX6B1P1-201ENST00000415962 213 ntBASIC4.74□□□□□ -1.65
CCNFP41002 AL669831.1-202ENST00000428504 417 ntBASIC4.74□□□□□ -1.65
CCNFP41002 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNFP41002 HMGB1P27-201ENST00000431429 603 ntBASIC4.74□□□□□ -1.65
CCNFP41002 MTND5P22-201ENST00000458380 195 ntBASIC4.74□□□□□ -1.65
CCNFP41002 RPL23AP56-201ENST00000460778 453 ntBASIC4.74□□□□□ -1.65
CCNFP41002 AC087884.1-201ENST00000469738 328 ntBASIC4.74□□□□□ -1.65
CCNFP41002 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNFP41002 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.74□□□□□ -1.65
CCNFP41002 Y_RNA.661-201ENST00000516003 99 ntBASIC4.74□□□□□ -1.65
CCNFP41002 Y_RNA.720-201ENST00000517166 92 ntBASIC4.74□□□□□ -1.65
CCNFP41002 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.74□□□□□ -1.65
CCNFP41002 BNIP3P5-201ENST00000562290 498 ntBASIC4.74□□□□□ -1.65
CCNFP41002 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNFP41002 AL354984.3-201ENST00000604803 325 ntBASIC4.74□□□□□ -1.65
CCNFP41002 AP000654.2-201ENST00000605633 586 ntBASIC4.74□□□□□ -1.65
CCNFP41002 AC083806.3-201ENST00000614016 455 ntBASIC4.74□□□□□ -1.65
CCNFP41002 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.74□□□□□ -1.65
CCNFP41002 MAPK10-320ENST00000641462 6696 ntBASIC4.74□□□□□ -1.65
CCNFP41002 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCNFP41002 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNFP41002 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNFP41002 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNFP41002 AC092435.4-201ENST00000623012 4159 ntBASIC4.73□□□□□ -1.65
CCNFP41002 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.73□□□□□ -1.65
CCNFP41002 ZFRP1-201ENST00000457579 2970 ntBASIC4.73□□□□□ -1.65
CCNFP41002 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.73□□□□□ -1.65
CCNFP41002 RNU6-1040P-201ENST00000383974 107 ntBASIC4.73□□□□□ -1.65
CCNFP41002 RNU6-574P-201ENST00000384265 107 ntBASIC4.73□□□□□ -1.65
CCNFP41002 RNU6-14P-201ENST00000384630 106 ntBASIC4.73□□□□□ -1.65
CCNFP41002 RNU6-882P-201ENST00000391025 103 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AL590762.2-201ENST00000395798 571 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AL109941.1-201ENST00000401925 229 ntBASIC4.73□□□□□ -1.65
CCNFP41002 Y_RNA.605-201ENST00000410577 105 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AL160275.2-201ENST00000412010 394 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNFP41002 AL160275.3-201ENST00000423876 471 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AL591704.1-201ENST00000432574 275 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNFP41002 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNFP41002 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCNFP41002 AC116337.1-201ENST00000509680 687 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AC025423.5-201ENST00000550230 219 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNFP41002 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNFP41002 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNFP41002 RPL7P50-201ENST00000600588 727 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AC012119.1-201ENST00000603184 222 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.73□□□□□ -1.65
CCNFP41002 AC005014.2-201ENST00000607795 599 ntBASIC4.73□□□□□ -1.65
CCNFP41002 AC009229.3-201ENST00000608056 282 ntBASIC4.73□□□□□ -1.65
CCNFP41002 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNFP41002 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNFP41002 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNFP41002 SCN1A-220ENST00000641603 12506 ntBASIC4.72□□□□□ -1.65
CCNFP41002 AL391684.1-202ENST00000641293 1636 ntBASIC4.72□□□□□ -1.65
CCNFP41002 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNFP41002 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CCNFP41002 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNFP41002 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNFP41002 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNFP41002 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
CCNFP41002 Y_RNA.112-201ENST00000363250 102 ntBASIC4.72□□□□□ -1.65
CCNFP41002 RNU6-593P-201ENST00000364716 112 ntBASIC4.72□□□□□ -1.65
CCNFP41002 RNU6-128P-201ENST00000383976 107 ntBASIC4.72□□□□□ -1.65
CCNFP41002 RNU6-1074P-201ENST00000383995 104 ntBASIC4.72□□□□□ -1.65
CCNFP41002 RNU6-890P-201ENST00000384121 107 ntBASIC4.72□□□□□ -1.65
CCNFP41002 AL445189.1-201ENST00000405722 338 ntBASIC4.72□□□□□ -1.65
CCNFP41002 AC119751.6-201ENST00000416712 186 ntBASIC4.72□□□□□ -1.65
CCNFP41002 BX842559.1-201ENST00000419615 532 ntBASIC4.72□□□□□ -1.65
CCNFP41002 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNFP41002 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNFP41002 RPL23AP69-201ENST00000431134 458 ntBASIC4.72□□□□□ -1.65
CCNFP41002 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNFP41002 AL359073.1-201ENST00000448036 403 ntBASIC4.72□□□□□ -1.65
CCNFP41002 AURKAPS2-201ENST00000454983 333 ntBASIC4.72□□□□□ -1.65
CCNFP41002 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNFP41002 RNA5SP446-201ENST00000515955 82 ntBASIC4.72□□□□□ -1.65
CCNFP41002 RNU6-976P-201ENST00000516086 111 ntBASIC4.72□□□□□ -1.65
CCNFP41002 RNU6-1137P-201ENST00000517073 99 ntBASIC4.72□□□□□ -1.65
CCNFP41002 AC021006.3-201ENST00000530771 192 ntBASIC4.72□□□□□ -1.65
CCNFP41002 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.72□□□□□ -1.65
CCNFP41002 AC026371.1-201ENST00000551867 419 ntBASIC4.72□□□□□ -1.65
CCNFP41002 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNFP41002 AC005951.2-201ENST00000576282 495 ntBASIC4.72□□□□□ -1.65
CCNFP41002 BNIP3P16-201ENST00000589779 534 ntBASIC4.72□□□□□ -1.65
CCNFP41002 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.72□□□□□ -1.65
CCNFP41002 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNFP41002 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.72□□□□□ -1.65
CCNFP41002 AC022418.1-201ENST00000624118 445 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms