Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXD12P35452 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXD12P35452 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD12P35452 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD12P35452 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXD12P35452 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXD12P35452 MIR3146-201ENST00000580367 79 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC012417.1-201ENST00000582307 1039 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXD12P35452 AC011451.2-201ENST00000604303 598 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 U3.45-201ENST00000607547 219 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC002550.2-201ENST00000621246 394 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD12P35452 AL359880.1-201ENST00000621879 266 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 PLCE1P1-201ENST00000622094 305 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AL159972.1-201ENST00000625150 448 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 TAB3P1-202ENST00000452645 1634 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD12P35452 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD12P35452 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD12P35452 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
HOXD12P35452 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD12P35452 RPL7P26-201ENST00000333817 754 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD12P35452 Y_RNA.1-201ENST00000352915 104 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 Y_RNA.9-201ENST00000362354 101 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 RNU6-181P-201ENST00000363225 107 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 SNORD35B-201ENST00000363660 87 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HOXD12P35452 RNU6-1103P-201ENST00000384150 107 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD12P35452 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD12P35452 RNU6-882P-201ENST00000391025 103 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD12P35452 SYF2P2-201ENST00000417620 583 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 RPS15AP12-201ENST00000419498 388 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD12P35452 TIMM9P3-201ENST00000428659 274 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD12P35452 AC073464.1-201ENST00000429823 534 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 MTCO2P11-201ENST00000431069 680 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 SNRPEP4-201ENST00000435815 279 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXD12P35452 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD12P35452 RBMX2P4-201ENST00000441256 376 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD12P35452 AL136380.1-201ENST00000447970 162 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AC132479.1-201ENST00000449160 144 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 MTND1P12-201ENST00000455231 147 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 RPS27AP1-201ENST00000475545 471 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AC092989.1-201ENST00000481235 277 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD12P35452 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD12P35452 AC017037.2-201ENST00000513850 890 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 RNU6-445P-201ENST00000516949 107 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD12P35452 AP001893.2-201ENST00000526949 202 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD12P35452 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD12P35452 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD12P35452 MED28P6-201ENST00000558776 231 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD12P35452 AP005205.1-201ENST00000563503 508 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD12P35452 MIR4474-201ENST00000579189 78 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 MIR3167-201ENST00000579623 85 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXD12P35452 AC091167.4-201ENST00000605079 184 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 AP002826.1-201ENST00000608835 315 ntBASIC3.91□□□□□ -1.78
HOXD12P35452 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD12P35452 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD12P35452 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD12P35452 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD12P35452 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HOXD12P35452 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HOXD12P35452 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HOXD12P35452 AC032011.1-201ENST00000611703 1549 ntBASIC3.9□□□□□ -1.78
HOXD12P35452 MTND5P1-201ENST00000445440 1375 ntBASIC3.9□□□□□ -1.78
HOXD12P35452 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.9□□□□□ -1.78
HOXD12P35452 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
HOXD12P35452 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.9□□□□□ -1.78
HOXD12P35452 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXD12P35452 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
HOXD12P35452 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD12P35452 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD12P35452 RNU6-282P-201ENST00000365357 103 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 SNORA20.2-201ENST00000383922 131 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 MIR183-201ENST00000384958 110 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 CIR1P3-201ENST00000405137 479 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXD12P35452 RPS29P4-201ENST00000414733 161 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 RPS23P10-201ENST00000416185 486 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 MTND1P2-201ENST00000430604 821 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms