Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.81□□□□□ -1.8
EPHA3P29320 AC090877.1-201ENST00000561418 344 ntBASIC3.81□□□□□ -1.8
EPHA3P29320 MIR4284-201ENST00000578924 81 ntBASIC3.81□□□□□ -1.8
EPHA3P29320 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EPHA3P29320 AC010525.2-201ENST00000590920 195 ntBASIC3.81□□□□□ -1.8
EPHA3P29320 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.81□□□□□ -1.8
EPHA3P29320 BNIP3P9-201ENST00000603714 553 ntBASIC3.81□□□□□ -1.8
EPHA3P29320 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.81□□□□□ -1.8
EPHA3P29320 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.81□□□□□ -1.8
EPHA3P29320 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.81□□□□□ -1.8
EPHA3P29320 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
EPHA3P29320 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
EPHA3P29320 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EPHA3P29320 AC009812.4-201ENST00000569134 1805 ntBASIC3.81□□□□□ -1.8
EPHA3P29320 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
EPHA3P29320 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.81□□□□□ -1.8
EPHA3P29320 MTND5P17-201ENST00000418405 1603 ntBASIC3.81□□□□□ -1.8
EPHA3P29320 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
EPHA3P29320 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA3P29320 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.8□□□□□ -1.8
EPHA3P29320 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA3P29320 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA3P29320 Y_RNA.86-201ENST00000363020 111 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 RNU1-32P-201ENST00000363937 159 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 SMIM11P1-201ENST00000369586 178 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA3P29320 RNU6-1029P-201ENST00000384109 107 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 SNORD37.1-201ENST00000390968 65 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AL136116.1-201ENST00000403591 381 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 NDUFS5P1-201ENST00000405668 289 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 ELOCP19-201ENST00000411919 318 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 RPL21P111-201ENST00000418453 477 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.8□□□□□ -1.8
EPHA3P29320 MTND4P25-201ENST00000441039 533 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.8□□□□□ -1.8
EPHA3P29320 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.8□□□□□ -1.8
EPHA3P29320 RPS20P20-201ENST00000460498 340 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC110792.1-201ENST00000491826 472 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 MTCYBP18-201ENST00000501056 747 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC083829.1-201ENST00000503756 657 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.8□□□□□ -1.8
EPHA3P29320 AC092436.1-201ENST00000506450 503 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC004062.1-201ENST00000509926 645 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.8□□□□□ -1.8
EPHA3P29320 AC105417.1-201ENST00000514691 285 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 RN7SKP219-201ENST00000516825 296 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.8□□□□□ -1.8
EPHA3P29320 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.8□□□□□ -1.8
EPHA3P29320 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.8□□□□□ -1.8
EPHA3P29320 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.8□□□□□ -1.8
EPHA3P29320 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.8□□□□□ -1.8
EPHA3P29320 AC005951.2-201ENST00000576282 495 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.8□□□□□ -1.8
EPHA3P29320 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.8□□□□□ -1.8
EPHA3P29320 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.8□□□□□ -1.8
EPHA3P29320 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.8□□□□□ -1.8
EPHA3P29320 AL670379.6-201ENST00000603753 252 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AL670379.11-201ENST00000604059 253 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC008162.1-201ENST00000604718 254 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AL670379.1-201ENST00000604752 252 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AL670379.5-201ENST00000605253 252 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AL670379.12-201ENST00000605291 253 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AL670379.8-201ENST00000605353 252 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 BNIP3P10-201ENST00000605360 577 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 LARP7P1-201ENST00000605576 316 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AL670379.7-201ENST00000605823 252 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 MIR6868-201ENST00000611215 58 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC025034.2-201ENST00000623264 286 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA3P29320 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA3P29320 AL133412.1-201ENST00000380194 2992 ntBASIC3.8□□□□□ -1.8
EPHA3P29320 AC139713.2-214ENST00000642059 1811 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EPHA3P29320 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
EPHA3P29320 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.79□□□□□ -1.8
EPHA3P29320 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
EPHA3P29320 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EPHA3P29320 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
EPHA3P29320 RNA5SP366-201ENST00000365454 123 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 RNU6-61P-201ENST00000365528 109 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 MIR141-201ENST00000384975 95 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 RPL30P2-201ENST00000414021 291 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.79□□□□□ -1.8
EPHA3P29320 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.79□□□□□ -1.8
EPHA3P29320 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.79□□□□□ -1.8
EPHA3P29320 USP9YP8-201ENST00000441913 500 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 SNRPEP8-201ENST00000442866 260 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.79□□□□□ -1.8
EPHA3P29320 MTND1P18-201ENST00000448191 573 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC009220.1-201ENST00000451614 275 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 snoU13.24-201ENST00000458998 104 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC011276.1-201ENST00000469688 323 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 RN7SL860P-201ENST00000473738 223 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 RN7SL459P-201ENST00000481078 302 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 VN1R104P-201ENST00000505115 1009 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC114786.4-201ENST00000508771 728 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms