Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC107075.1-201ENST00000613695 314 ntBASIC2.05□□□□□ -2.08
COL8A2P25067 AC006386.1-201ENST00000619436 415 ntBASIC2.05□□□□□ -2.08
COL8A2P25067 AC109809.1-201ENST00000619665 545 ntBASIC2.05□□□□□ -2.08
COL8A2P25067 AC064859.1-201ENST00000624741 174 ntBASIC2.05□□□□□ -2.08
COL8A2P25067 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.05□□□□□ -2.08
COL8A2P25067 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.05□□□□□ -2.08
COL8A2P25067 CDR1-202ENST00000625883 1485 ntBASIC2.05□□□□□ -2.08
COL8A2P25067 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL8A2P25067 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.05□□□□□ -2.08
COL8A2P25067 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL8A2P25067 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.05□□□□□ -2.08
COL8A2P25067 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.05□□□□□ -2.08
COL8A2P25067 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.04□□□□□ -2.08
COL8A2P25067 AP000568.1-201ENST00000282964 442 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL8A2P25067 MIR6073-201ENST00000352083 89 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL8A2P25067 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 CD24P4-201ENST00000382840 243 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 RNU6-657P-201ENST00000383904 107 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 MIR513B-201ENST00000385136 84 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 RNU4-53P-201ENST00000410828 140 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 HMGB1P49-201ENST00000418882 569 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 AC027673.1-201ENST00000456245 405 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.04□□□□□ -2.08
COL8A2P25067 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.04□□□□□ -2.08
COL8A2P25067 RN7SKP31-201ENST00000516354 278 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 RN7SKP265-201ENST00000516448 223 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.04□□□□□ -2.08
COL8A2P25067 AP001804.3-201ENST00000525146 880 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL8A2P25067 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL8A2P25067 AC008127.2-201ENST00000549925 1075 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.04□□□□□ -2.08
COL8A2P25067 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 AC022662.1-201ENST00000580252 331 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.04□□□□□ -2.08
COL8A2P25067 AC013244.3-201ENST00000605614 388 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 AC007349.4-201ENST00000608114 532 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 AP001521.1-201ENST00000609150 300 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 AC106028.5-201ENST00000610332 395 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 BX664608.1-201ENST00000610519 487 ntBASIC2.04□□□□□ -2.08
COL8A2P25067 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.04□□□□□ -2.08
COL8A2P25067 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
COL8A2P25067 NUP58P1-201ENST00000502546 1738 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL8A2P25067 FRG1BP-201ENST00000278882 761 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
COL8A2P25067 RNU6-216P-201ENST00000363282 104 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 Y_RNA.192-201ENST00000363977 102 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 RNU6-1027P-201ENST00000383998 107 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 U3.29-201ENST00000391296 212 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AL024474.1-201ENST00000404655 591 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 RNA5SP38-201ENST00000410750 119 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 ELOCP9-201ENST00000418624 239 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COL8A2P25067 USP9YP11-201ENST00000427537 717 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.03□□□□□ -2.08
COL8A2P25067 AC098826.1-201ENST00000433943 471 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 MTCYBP34-201ENST00000439552 670 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.03□□□□□ -2.08
COL8A2P25067 HIGD1AP2-201ENST00000446367 280 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 Z73417.1-201ENST00000447373 778 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.03□□□□□ -2.08
COL8A2P25067 OFD1P3Y-201ENST00000453312 783 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.03□□□□□ -2.08
COL8A2P25067 USP9YP25-201ENST00000457708 443 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AC092757.1-201ENST00000467293 467 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.03□□□□□ -2.08
COL8A2P25067 OR4G11P-201ENST00000492842 939 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.03□□□□□ -2.08
COL8A2P25067 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.03□□□□□ -2.08
COL8A2P25067 AC006390.1-201ENST00000508068 283 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AC234781.5-201ENST00000508429 271 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.03□□□□□ -2.08
COL8A2P25067 AC109445.1-201ENST00000512356 383 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AC008549.1-201ENST00000512900 643 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 SNORA31.1-201ENST00000515993 133 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 RNU6-27P-201ENST00000516146 107 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 SNORA31.5-201ENST00000516190 133 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.03□□□□□ -2.08
COL8A2P25067 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.03□□□□□ -2.08
COL8A2P25067 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.03□□□□□ -2.08
COL8A2P25067 AC125611.1-201ENST00000549563 229 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.03□□□□□ -2.08
COL8A2P25067 HIGD1AP17-201ENST00000554576 276 ntBASIC2.03□□□□□ -2.08
COL8A2P25067 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.03□□□□□ -2.08
COL8A2P25067 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COL8A2P25067 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.03□□□□□ -2.08
COL8A2P25067 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.03□□□□□ -2.08
COL8A2P25067 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms