Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 RNU2-58P-201ENST00000516403 183 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 RNU6-914P-201ENST00000516749 109 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.28□□□□□ -1.56
ERCC3P19447 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 AP000827.1-201ENST00000527814 258 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.28□□□□□ -1.56
ERCC3P19447 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 AC009233.1-201ENST00000616477 371 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 AL445363.3-201ENST00000623080 671 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ERCC3P19447 HSPA8P4-201ENST00000511877 1920 ntBASIC5.28□□□□□ -1.56
ERCC3P19447 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC3P19447 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC3P19447 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ERCC3P19447 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC3P19447 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC3P19447 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
ERCC3P19447 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC3P19447 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.27□□□□□ -1.57
ERCC3P19447 AC107068.1-201ENST00000563286 4218 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
ERCC3P19447 RNU6-50P-201ENST00000362356 103 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 Y_RNA.58-201ENST00000362807 102 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 Y_RNA.154-201ENST00000363624 102 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 SNORD113-7-201ENST00000363762 77 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 Y_RNA.184-201ENST00000363884 108 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 RNU6-82P-201ENST00000363970 107 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 RNY3P1-201ENST00000365085 102 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 RNY3-201ENST00000365484 102 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC3P19447 Y_RNA.490-201ENST00000384413 102 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 AL590704.1-201ENST00000402856 794 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 CRYBB2P1-203ENST00000415709 538 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 TMSB10P2-201ENST00000416049 131 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC3P19447 USP9YP20-201ENST00000419224 558 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 RPS29P17-201ENST00000430795 166 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC3P19447 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.27□□□□□ -1.57
ERCC3P19447 AC005019.1-201ENST00000436455 431 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 RPL23AP93-201ENST00000440847 484 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC3P19447 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC3P19447 RPL21P93-201ENST00000480465 489 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 AC026402.1-201ENST00000513642 170 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 SCARNA15.2-201ENST00000516409 127 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 RNA5SP471-201ENST00000516971 106 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 AP001804.3-201ENST00000525146 880 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 AP004242.1-201ENST00000533701 349 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC3P19447 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.27□□□□□ -1.57
ERCC3P19447 AC007224.1-201ENST00000564410 144 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 ARF4P1-201ENST00000605447 541 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.27□□□□□ -1.57
ERCC3P19447 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC3P19447 Z99571.1-201ENST00000636677 394 ntBASIC5.27□□□□□ -1.57
ERCC3P19447 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
ERCC3P19447 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC3P19447 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC3P19447 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC3P19447 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ERCC3P19447 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.26□□□□□ -1.57
ERCC3P19447 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ERCC3P19447 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC3P19447 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ERCC3P19447 RNA5SP502-201ENST00000362694 119 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 Y_RNA.67-201ENST00000362870 100 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 Y_RNA.535-201ENST00000384612 99 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 MIR3074-201ENST00000384885 81 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.26□□□□□ -1.57
ERCC3P19447 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC3P19447 AL590383.1-201ENST00000428602 75 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AL591704.1-201ENST00000432574 275 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC3P19447 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.26□□□□□ -1.57
ERCC3P19447 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ERCC3P19447 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.26□□□□□ -1.57
ERCC3P19447 AC023141.12-201ENST00000512399 199 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC3P19447 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC3P19447 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC3P19447 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.26□□□□□ -1.57
ERCC3P19447 OR11H5P-201ENST00000554039 926 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AL355375.2-201ENST00000574825 175 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
ERCC3P19447 BNIP3P25-201ENST00000596023 559 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AL121757.2-201ENST00000611223 313 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 uc_338.15-201ENST00000615470 191 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AL133216.2-202ENST00000634512 349 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.26□□□□□ -1.57
ERCC3P19447 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.26□□□□□ -1.57
ERCC3P19447 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC3P19447 ZNF285B-201ENST00000561698 1767 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC3P19447 AC125257.1-201ENST00000560400 2930 ntBASIC5.26□□□□□ -1.57
ERCC3P19447 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms