Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 MIR5187-201ENST00000583479 76 ntBASIC4.02□□□□□ -1.77
RHOP08100 AC011712.1-201ENST00000588959 234 ntBASIC4.02□□□□□ -1.77
RHOP08100 AL161756.2-201ENST00000604597 246 ntBASIC4.02□□□□□ -1.77
RHOP08100 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 AC233309.1-201ENST00000619522 751 ntBASIC4.02□□□□□ -1.77
RHOP08100 AC015967.1-201ENST00000619893 476 ntBASIC4.02□□□□□ -1.77
RHOP08100 AL357559.1-201ENST00000622228 274 ntBASIC4.02□□□□□ -1.77
RHOP08100 AC040168.1-201ENST00000623594 991 ntBASIC4.02□□□□□ -1.77
RHOP08100 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHOP08100 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.02□□□□□ -1.77
RHOP08100 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RHOP08100 MTND4P23-201ENST00000447723 1363 ntBASIC4.02□□□□□ -1.77
RHOP08100 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.01□□□□□ -1.77
RHOP08100 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHOP08100 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RHOP08100 RIOK3P1-201ENST00000418778 1528 ntBASIC4.01□□□□□ -1.77
RHOP08100 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.01□□□□□ -1.77
RHOP08100 AC027287.1-201ENST00000553115 1453 ntBASIC4.01□□□□□ -1.77
RHOP08100 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHOP08100 RNU1-108P-201ENST00000362556 161 ntBASIC4.01□□□□□ -1.77
RHOP08100 RNU6-845P-201ENST00000362578 103 ntBASIC4.01□□□□□ -1.77
RHOP08100 RNU6-223P-201ENST00000362830 107 ntBASIC4.01□□□□□ -1.77
RHOP08100 Y_RNA.142-201ENST00000363491 102 ntBASIC4.01□□□□□ -1.77
RHOP08100 RNU5E-8P-201ENST00000363502 116 ntBASIC4.01□□□□□ -1.77
RHOP08100 RNU6-39P-201ENST00000384344 107 ntBASIC4.01□□□□□ -1.77
RHOP08100 MIR199A2-201ENST00000385289 110 ntBASIC4.01□□□□□ -1.77
RHOP08100 RNU6-821P-201ENST00000390995 107 ntBASIC4.01□□□□□ -1.77
RHOP08100 RPL23AP48-201ENST00000406913 488 ntBASIC4.01□□□□□ -1.77
RHOP08100 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.01□□□□□ -1.77
RHOP08100 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.01□□□□□ -1.77
RHOP08100 MTCO3P12-201ENST00000416718 547 ntBASIC4.01□□□□□ -1.77
RHOP08100 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.01□□□□□ -1.77
RHOP08100 SRIP2-201ENST00000428470 166 ntBASIC4.01□□□□□ -1.77
RHOP08100 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.01□□□□□ -1.77
RHOP08100 HSPD1P21-201ENST00000436541 245 ntBASIC4.01□□□□□ -1.77
RHOP08100 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.01□□□□□ -1.77
RHOP08100 HMGB1P37-201ENST00000439613 609 ntBASIC4.01□□□□□ -1.77
RHOP08100 CBWD4P-201ENST00000445695 655 ntBASIC4.01□□□□□ -1.77
RHOP08100 AC133473.1-201ENST00000455173 299 ntBASIC4.01□□□□□ -1.77
RHOP08100 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.01□□□□□ -1.77
RHOP08100 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.01□□□□□ -1.77
RHOP08100 GMFBP1-201ENST00000467831 427 ntBASIC4.01□□□□□ -1.77
RHOP08100 HMGB1P25-201ENST00000468402 607 ntBASIC4.01□□□□□ -1.77
RHOP08100 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHOP08100 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.01□□□□□ -1.77
RHOP08100 AC110768.1-201ENST00000509222 400 ntBASIC4.01□□□□□ -1.77
RHOP08100 RNA5SP401-201ENST00000515920 127 ntBASIC4.01□□□□□ -1.77
RHOP08100 IGKV2-38-201ENST00000517443 247 ntBASIC4.01□□□□□ -1.77
RHOP08100 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHOP08100 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHOP08100 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.01□□□□□ -1.77
RHOP08100 AL133153.1-201ENST00000557756 303 ntBASIC4.01□□□□□ -1.77
RHOP08100 RPL21P12-201ENST00000559810 515 ntBASIC4.01□□□□□ -1.77
RHOP08100 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.01□□□□□ -1.77
RHOP08100 CYP4A43P-201ENST00000568156 121 ntBASIC4.01□□□□□ -1.77
RHOP08100 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.01□□□□□ -1.77
RHOP08100 AC007179.3-201ENST00000604976 235 ntBASIC4.01□□□□□ -1.77
RHOP08100 AL031666.3-201ENST00000609320 1006 ntBASIC4.01□□□□□ -1.77
RHOP08100 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
RHOP08100 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHOP08100 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4□□□□□ -1.77
RHOP08100 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RHOP08100 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
RHOP08100 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4□□□□□ -1.77
RHOP08100 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4□□□□□ -1.77
RHOP08100 PNPT1P2-201ENST00000456768 2050 ntBASIC4□□□□□ -1.77
RHOP08100 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RHOP08100 RNU6-996P-201ENST00000365438 107 ntBASIC4□□□□□ -1.77
RHOP08100 RNU6-1011P-201ENST00000384668 107 ntBASIC4□□□□□ -1.77
RHOP08100 MT-TC-201ENST00000387405 66 ntBASIC4□□□□□ -1.77
RHOP08100 MIR454-201ENST00000390180 115 ntBASIC4□□□□□ -1.77
RHOP08100 MIR1250-201ENST00000408098 113 ntBASIC4□□□□□ -1.77
RHOP08100 RNA5SP56-201ENST00000410277 118 ntBASIC4□□□□□ -1.77
RHOP08100 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4□□□□□ -1.77
RHOP08100 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4□□□□□ -1.77
RHOP08100 ELOCP18-201ENST00000434209 337 ntBASIC4□□□□□ -1.77
RHOP08100 CYCSP43-201ENST00000438233 310 ntBASIC4□□□□□ -1.77
RHOP08100 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4□□□□□ -1.77
RHOP08100 AC016696.1-201ENST00000446949 318 ntBASIC4□□□□□ -1.77
RHOP08100 AC073415.1-201ENST00000449240 153 ntBASIC4□□□□□ -1.77
RHOP08100 AL121877.1-201ENST00000453704 622 ntBASIC4□□□□□ -1.77
RHOP08100 CREM-226ENST00000469949 721 ntTSL 3 BASIC4□□□□□ -1.77
RHOP08100 ST13P14-201ENST00000474095 734 ntBASIC4□□□□□ -1.77
RHOP08100 AC106707.2-201ENST00000484182 374 ntBASIC4□□□□□ -1.77
RHOP08100 AL163973.1-201ENST00000484753 577 ntBASIC4□□□□□ -1.77
RHOP08100 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4□□□□□ -1.77
RHOP08100 AC093278.1-201ENST00000494700 600 ntBASIC4□□□□□ -1.77
RHOP08100 AC017037.1-201ENST00000508460 471 ntBASIC4□□□□□ -1.77
RHOP08100 AC105417.1-201ENST00000514691 285 ntBASIC4□□□□□ -1.77
RHOP08100 RNA5SP164-201ENST00000516533 110 ntBASIC4□□□□□ -1.77
RHOP08100 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4□□□□□ -1.77
RHOP08100 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4□□□□□ -1.77
RHOP08100 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4□□□□□ -1.77
RHOP08100 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms