Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 CCT4P2-201ENST00000233836 1548 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 Y_RNA.97-201ENST00000363094 102 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 RNU6-619P-201ENST00000365146 108 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL3A1P02461 AL603766.1-201ENST00000407763 664 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 RNA5SP118-201ENST00000410385 109 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.14□□□□□ -1.75
COL3A1P02461 SNRPEP10-201ENST00000420249 274 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.14□□□□□ -1.75
COL3A1P02461 AL353729.1-201ENST00000425044 720 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.14□□□□□ -1.75
COL3A1P02461 MTND6P13-201ENST00000443510 523 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC140076.1-201ENST00000449897 361 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.14□□□□□ -1.75
COL3A1P02461 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.14□□□□□ -1.75
COL3A1P02461 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.14□□□□□ -1.75
COL3A1P02461 RPS20P20-201ENST00000460498 340 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC114981.1-201ENST00000503897 678 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC114967.1-201ENST00000504890 259 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.14□□□□□ -1.75
COL3A1P02461 HMGB1P28-201ENST00000507778 552 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC048346.1-201ENST00000510247 144 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.14□□□□□ -1.75
COL3A1P02461 FTH1P9-201ENST00000513251 355 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 PSMA2P1-201ENST00000526365 646 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.14□□□□□ -1.75
COL3A1P02461 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.14□□□□□ -1.75
COL3A1P02461 POLR2KP1-201ENST00000553226 168 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.14□□□□□ -1.75
COL3A1P02461 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.14□□□□□ -1.75
COL3A1P02461 MIR4672-201ENST00000583126 81 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 NRBF2P1-201ENST00000587407 859 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.14□□□□□ -1.75
COL3A1P02461 AP001429.1-201ENST00000602568 530 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 AL132765.2-201ENST00000610812 351 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL3A1P02461 AC138305.3-201ENST00000624988 240 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 PISRT1-201ENST00000626175 531 ntBASIC4.14□□□□□ -1.75
COL3A1P02461 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL3A1P02461 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.14□□□□□ -1.75
COL3A1P02461 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL3A1P02461 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
COL3A1P02461 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL3A1P02461 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL3A1P02461 DBF4P1-201ENST00000412976 1892 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 RPL7P26-201ENST00000333817 754 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 RNU6-492P-201ENST00000363035 104 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL3A1P02461 RNU6-185P-201ENST00000384421 107 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 RNU6-1122P-201ENST00000384449 107 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.13□□□□□ -1.75
COL3A1P02461 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.13□□□□□ -1.75
COL3A1P02461 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.13□□□□□ -1.75
COL3A1P02461 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.13□□□□□ -1.75
COL3A1P02461 AC009961.2-201ENST00000435771 251 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 SDCBPP1-201ENST00000440192 890 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.13□□□□□ -1.75
COL3A1P02461 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 USP9YP15-201ENST00000442391 422 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 RPL23AP20-201ENST00000447965 421 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.13□□□□□ -1.75
COL3A1P02461 RPL18AP17-201ENST00000455326 198 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.13□□□□□ -1.75
COL3A1P02461 RPL39P36-201ENST00000490784 156 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AC012170.1-201ENST00000495139 359 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.13□□□□□ -1.75
COL3A1P02461 AC023141.12-201ENST00000512399 199 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 RNA5SP135-201ENST00000517019 125 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 RNU6-1261P-201ENST00000517194 104 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.13□□□□□ -1.75
COL3A1P02461 AC022690.1-201ENST00000526681 550 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL3A1P02461 HPRT1P3-201ENST00000539521 576 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AC078814.3-201ENST00000553036 491 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.13□□□□□ -1.75
COL3A1P02461 HIF1AP1-201ENST00000553642 175 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AC138915.2-201ENST00000569776 97 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.13□□□□□ -1.75
COL3A1P02461 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.13□□□□□ -1.75
COL3A1P02461 AL035413.2-201ENST00000604801 525 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AL136363.1-201ENST00000605349 337 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AC103710.4-201ENST00000609301 899 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 AL158801.5-201ENST00000623123 465 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 MIR622-201ENST00000638396 96 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL3A1P02461 GDI2P1-201ENST00000429312 1336 ntBASIC4.13□□□□□ -1.75
COL3A1P02461 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL3A1P02461 RNU6-666P-201ENST00000363499 107 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 RNY4P34-201ENST00000364779 95 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.12□□□□□ -1.75
COL3A1P02461 SUGT1P1-201ENST00000379514 476 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 Y_RNA.419-201ENST00000384041 102 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 MT-TP-201ENST00000387461 68 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 U8.14-201ENST00000390843 143 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.12□□□□□ -1.75
COL3A1P02461 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.12□□□□□ -1.75
COL3A1P02461 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.12□□□□□ -1.75
COL3A1P02461 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.12□□□□□ -1.75
COL3A1P02461 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms