Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC003982.1-202ENST00000469928 248 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 KC877373.1-201ENST00000479066 408 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 SRIP1-201ENST00000489235 288 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC135721.1-201ENST00000497954 479 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC020699.1-201ENST00000505161 445 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RNU6-311P-201ENST00000516224 102 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 SCARNA15.2-201ENST00000516409 127 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 DNAJC8P1-201ENST00000554535 372 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RPL21P12-201ENST00000559810 515 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC061975.8-201ENST00000587058 721 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AL139344.1-201ENST00000605228 195 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC107952.2-201ENST00000606048 486 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC097468.3-201ENST00000607956 456 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC104237.2-201ENST00000612456 443 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AP003122.6-201ENST00000623831 495 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC087359.1-201ENST00000508335 1740 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 SNORD56.5-201ENST00000364281 72 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 RNA5SP267-201ENST00000364893 126 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 RNU6-723P-201ENST00000383973 107 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 MIR34B-201ENST00000385076 84 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 FO393413.1-201ENST00000402892 195 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 MTCO1P17-201ENST00000411522 491 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 TPMTP3-201ENST00000411928 735 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 RPL7P8-201ENST00000411964 730 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC005300.1-201ENST00000428401 373 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL356867.1-201ENST00000429623 299 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC022018.1-201ENST00000430685 241 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 UBE2V1P13-201ENST00000436983 439 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 RSU1P2-202ENST00000437884 485 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 RSL24D1P3-201ENST00000449255 495 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 RPS3AP43-201ENST00000479743 781 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL358832.1-201ENST00000497800 389 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AIG1P1-201ENST00000503376 148 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 SEM1P1-201ENST00000506694 209 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 RNA5SP402-201ENST00000517148 110 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC023538.1-201ENST00000534576 736 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC138761.3-201ENST00000579993 334 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC060771.1-201ENST00000582031 164 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC079089.3-201ENST00000603094 673 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC024220.1-201ENST00000603675 484 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL357094.1-201ENST00000603845 844 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC024560.3-201ENST00000608482 349 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC103710.4-201ENST00000609301 899 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL050303.3-201ENST00000613704 284 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL392048.1-201ENST00000613946 534 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AL159972.1-201ENST00000625150 448 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 OR5H6-203ENST00000642105 978 ntBASIC2.09□□□□□ -2.07
HLA-DQA1P01909 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DQA1P01909 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
HLA-DQA1P01909 AL138713.1-201ENST00000624026 2130 ntBASIC2.09□□□□□ -2.08
HLA-DQA1P01909 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.09□□□□□ -2.08
HLA-DQA1P01909 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
HLA-DQA1P01909 TPTE2P4-201ENST00000258589 1605 ntBASIC2.09□□□□□ -2.08
HLA-DQA1P01909 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
HLA-DQA1P01909 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.08
HLA-DQA1P01909 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DQA1P01909 FAM133CP-201ENST00000332869 704 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 MIR22-201ENST00000362190 85 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 SNORD46.1-201ENST00000364139 104 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 U3.20-201ENST00000390909 217 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 RNA5SP120-201ENST00000410900 112 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 MTND1P21-201ENST00000412991 285 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 SPA17P1-201ENST00000416656 452 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DQA1P01909 RPL7L1P10-201ENST00000427790 463 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 AL512844.2-201ENST00000433990 593 ntBASIC2.08□□□□□ -2.08
HLA-DQA1P01909 RPS12P2-201ENST00000439728 269 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms