Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RPS7P13-201ENST00000413955 498 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX58O95786 EEF1A1P41-201ENST00000414667 207 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX58O95786 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX58O95786 AC018630.2-202ENST00000422992 927 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX58O95786 RSU1P2-202ENST00000437884 485 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AC107083.1-201ENST00000439643 279 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX58O95786 AP001486.1-201ENST00000463339 476 ntBASIC3.79□□□□□ -1.8
DDX58O95786 RPL30P14-201ENST00000482744 348 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX58O95786 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX58O95786 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX58O95786 RNU6-1231P-201ENST00000517185 103 ntBASIC3.79□□□□□ -1.8
DDX58O95786 RPL12P22-201ENST00000519073 490 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX58O95786 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX58O95786 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX58O95786 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX58O95786 AL137843.1-201ENST00000605078 385 ntBASIC3.79□□□□□ -1.8
DDX58O95786 MIR6076-201ENST00000617521 113 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AC112204.3-201ENST00000623822 332 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AC006386.2-201ENST00000624491 75 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AC012005.1-201ENST00000624575 75 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AL137790.1-201ENST00000634283 177 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AC097655.1-201ENST00000635075 318 ntBASIC3.79□□□□□ -1.8
DDX58O95786 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX58O95786 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX58O95786 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX58O95786 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX58O95786 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX58O95786 AL035425.3-201ENST00000564206 4996 ntBASIC3.78□□□□□ -1.8
DDX58O95786 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
DDX58O95786 RNU6-553P-201ENST00000364047 96 ntBASIC3.78□□□□□ -1.8
DDX58O95786 RNU6-7-201ENST00000364784 107 ntBASIC3.78□□□□□ -1.8
DDX58O95786 RNU6-8-201ENST00000365467 107 ntBASIC3.78□□□□□ -1.8
DDX58O95786 RNU6-920P-201ENST00000410926 92 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX58O95786 RPL31P12-201ENST00000422587 358 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AC233728.2-201ENST00000425348 757 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX58O95786 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX58O95786 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX58O95786 ZNF114P1-201ENST00000453500 292 ntBASIC3.78□□□□□ -1.8
DDX58O95786 SNORA59A-201ENST00000459326 152 ntBASIC3.78□□□□□ -1.8
DDX58O95786 RPL30P6-201ENST00000475925 342 ntBASIC3.78□□□□□ -1.8
DDX58O95786 MTND1P22-201ENST00000510572 951 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AC119751.5-201ENST00000514077 770 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AC116347.2-201ENST00000514912 523 ntBASIC3.78□□□□□ -1.8
DDX58O95786 RNU1-103P-201ENST00000516502 125 ntBASIC3.78□□□□□ -1.8
DDX58O95786 SNORA31.22-201ENST00000517204 135 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX58O95786 MTND2P38-201ENST00000522536 667 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX58O95786 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.78□□□□□ -1.8
DDX58O95786 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.78□□□□□ -1.8
DDX58O95786 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX58O95786 AC090888.1-201ENST00000561335 1141 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX58O95786 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AC112187.2-201ENST00000604345 283 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AL603758.1-201ENST00000618654 241 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AC007318.2-201ENST00000620999 243 ntBASIC3.78□□□□□ -1.8
DDX58O95786 AC091931.1-201ENST00000623488 728 ntBASIC3.78□□□□□ -1.8
DDX58O95786 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
DDX58O95786 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX58O95786 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX58O95786 AC021755.1-201ENST00000559747 1447 ntBASIC3.78□□□□□ -1.8
DDX58O95786 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX58O95786 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX58O95786 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
DDX58O95786 RNU6-500P-201ENST00000362349 107 ntBASIC3.77□□□□□ -1.81
DDX58O95786 RNU6-223P-201ENST00000362830 107 ntBASIC3.77□□□□□ -1.81
DDX58O95786 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX58O95786 SNORA1.3-201ENST00000384676 136 ntBASIC3.77□□□□□ -1.81
DDX58O95786 RNU6-754P-201ENST00000391166 107 ntBASIC3.77□□□□□ -1.81
DDX58O95786 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.77□□□□□ -1.81
DDX58O95786 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX58O95786 UBE2FP1-201ENST00000416536 447 ntBASIC3.77□□□□□ -1.81
DDX58O95786 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX58O95786 AL445669.1-201ENST00000426743 755 ntBASIC3.77□□□□□ -1.81
DDX58O95786 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX58O95786 AC092573.2-201ENST00000434546 243 ntBASIC3.77□□□□□ -1.81
DDX58O95786 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX58O95786 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX58O95786 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX58O95786 RPL7P36-201ENST00000444633 681 ntBASIC3.77□□□□□ -1.81
DDX58O95786 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX58O95786 HMGN2P13-201ENST00000476476 274 ntBASIC3.77□□□□□ -1.81
DDX58O95786 BET1P1-201ENST00000482276 359 ntBASIC3.77□□□□□ -1.81
DDX58O95786 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX58O95786 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX58O95786 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX58O95786 AC007834.2-201ENST00000536310 343 ntBASIC3.77□□□□□ -1.81
DDX58O95786 OSBPL9P5-201ENST00000542581 171 ntBASIC3.77□□□□□ -1.81
DDX58O95786 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.77□□□□□ -1.81
DDX58O95786 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX58O95786 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms