Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC002546.1-201ENST00000588041 2504 ntBASIC1.9□□□□□ -2.11
POLR1AO95602 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
POLR1AO95602 MIR222-201ENST00000384992 110 ntBASIC1.89□□□□□ -2.11
POLR1AO95602 FO393413.1-201ENST00000402892 195 ntBASIC1.89□□□□□ -2.11
POLR1AO95602 AC022022.1-201ENST00000430304 178 ntBASIC1.89□□□□□ -2.11
POLR1AO95602 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.89□□□□□ -2.11
POLR1AO95602 AL360221.1-201ENST00000445989 335 ntBASIC1.89□□□□□ -2.11
POLR1AO95602 RNU6-405P-201ENST00000516637 110 ntBASIC1.89□□□□□ -2.11
POLR1AO95602 RNU6-467P-201ENST00000517027 110 ntBASIC1.89□□□□□ -2.11
POLR1AO95602 AC245036.5-201ENST00000596330 847 ntBASIC1.89□□□□□ -2.11
POLR1AO95602 RPL23AP47-201ENST00000408017 460 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 Z96811.1-201ENST00000445880 108 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
POLR1AO95602 SNRPFP3-201ENST00000457792 225 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.88□□□□□ -2.11
POLR1AO95602 MTND4P34-201ENST00000572715 1371 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 MTCO1P40-201ENST00000574371 625 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.88□□□□□ -2.11
POLR1AO95602 AL356118.1-201ENST00000635272 1078 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
POLR1AO95602 AP000648.3-201ENST00000623539 4507 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 SNORA40.6-201ENST00000391153 128 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 RPL7P27-201ENST00000403775 720 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 MIR1285-1-201ENST00000408593 84 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 RNU2-32P-201ENST00000411193 191 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.88□□□□□ -2.11
POLR1AO95602 RPS6P14-201ENST00000425165 719 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 VN1R108P-201ENST00000431580 830 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 UBE2FP3-201ENST00000436366 524 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 LSM1P1-201ENST00000438629 273 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 COX6CP12-201ENST00000446748 202 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.88□□□□□ -2.11
POLR1AO95602 DUXAP5-201ENST00000529668 529 ntBASIC1.88□□□□□ -2.11
POLR1AO95602 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.88□□□□□ -2.11
POLR1AO95602 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.88□□□□□ -2.11
POLR1AO95602 RNU6-1180P-201ENST00000364935 107 ntBASIC1.87□□□□□ -2.11
POLR1AO95602 AC234781.2-201ENST00000426370 994 ntBASIC1.87□□□□□ -2.11
POLR1AO95602 FABP5P3-201ENST00000437960 408 ntBASIC1.87□□□□□ -2.11
POLR1AO95602 CASP3P1-201ENST00000446037 609 ntBASIC1.87□□□□□ -2.11
POLR1AO95602 RFC5P1-201ENST00000454419 874 ntBASIC1.87□□□□□ -2.11
POLR1AO95602 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.87□□□□□ -2.11
POLR1AO95602 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.87□□□□□ -2.11
POLR1AO95602 MTND4P27-201ENST00000450813 1354 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
POLR1AO95602 DNAJC19P6-201ENST00000401853 280 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.86□□□□□ -2.11
POLR1AO95602 AC073464.3-201ENST00000422564 712 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 UBE2V1P13-201ENST00000436983 439 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.86□□□□□ -2.11
POLR1AO95602 MTCYBP12-201ENST00000440559 1134 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.86□□□□□ -2.11
POLR1AO95602 AC067838.1-201ENST00000606064 577 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 AC020658.4-201ENST00000613987 684 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 AL031601.2-202ENST00000622650 282 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.86□□□□□ -2.11
POLR1AO95602 ARL5AP3-201ENST00000439327 386 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 HMGB3P3-201ENST00000510526 400 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 MIR514B-201ENST00000516774 80 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 GLYCAM1-201ENST00000546596 285 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.86□□□□□ -2.11
POLR1AO95602 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.86□□□□□ -2.11
POLR1AO95602 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.86□□□□□ -2.11
POLR1AO95602 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.86□□□□□ -2.11
POLR1AO95602 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.85□□□□□ -2.11
POLR1AO95602 MTCO1P48-201ENST00000448024 1096 ntBASIC1.85□□□□□ -2.11
POLR1AO95602 ARL2BPP4-201ENST00000506854 471 ntBASIC1.85□□□□□ -2.11
POLR1AO95602 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.85□□□□□ -2.11
POLR1AO95602 HSPE1P3-201ENST00000559254 309 ntBASIC1.85□□□□□ -2.11
POLR1AO95602 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.85□□□□□ -2.11
POLR1AO95602 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.85□□□□□ -2.11
POLR1AO95602 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.85□□□□□ -2.11
POLR1AO95602 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.84□□□□□ -2.11
POLR1AO95602 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.84□□□□□ -2.11
POLR1AO95602 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
POLR1AO95602 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.84□□□□□ -2.11
POLR1AO95602 HMGB3P17-201ENST00000504195 649 ntBASIC1.84□□□□□ -2.11
POLR1AO95602 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.84□□□□□ -2.11
POLR1AO95602 AC006338.1-201ENST00000618453 749 ntBASIC1.84□□□□□ -2.11
POLR1AO95602 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
POLR1AO95602 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
POLR1AO95602 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
POLR1AO95602 RNU1-139P-201ENST00000391307 165 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 ZNF90P2-204ENST00000419323 1075 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 AC010285.1-201ENST00000470580 392 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
POLR1AO95602 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.83□□□□□ -2.12
POLR1AO95602 AC087373.1-201ENST00000524920 491 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 AC084364.2-201ENST00000546924 395 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.83□□□□□ -2.12
POLR1AO95602 ATG12P2-201ENST00000456830 416 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 MRPL42P6-201ENST00000486397 371 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.83□□□□□ -2.12
POLR1AO95602 AP000907.2-201ENST00000530827 353 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 SYF2P1-201ENST00000550658 413 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 AC079597.1-201ENST00000624306 508 ntBASIC1.83□□□□□ -2.12
POLR1AO95602 AL136520.1-201ENST00000600311 1322 ntBASIC1.82□□□□□ -2.12
POLR1AO95602 AL445669.1-201ENST00000426743 755 ntBASIC1.82□□□□□ -2.12
POLR1AO95602 SDCBPP1-201ENST00000440192 890 ntBASIC1.82□□□□□ -2.12
POLR1AO95602 AC087343.1-201ENST00000477341 475 ntBASIC1.82□□□□□ -2.12
POLR1AO95602 RN7SKP265-201ENST00000516448 223 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms