Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.53□□□□□ -2
CTDNEP1O95476 RPL23AP78-201ENST00000599928 470 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AC107075.1-201ENST00000613695 314 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AL138880.2-201ENST00000616214 239 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
CTDNEP1O95476 AL359693.1-201ENST00000614959 2407 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTDNEP1O95476 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTDNEP1O95476 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CTDNEP1O95476 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTDNEP1O95476 MIR449A-201ENST00000362113 91 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 RNU4-68P-201ENST00000364314 141 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 RNU2-28P-201ENST00000410457 189 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 RNU6-712P-201ENST00000410558 100 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 MTCO1P48-201ENST00000448024 1096 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 AL590664.1-201ENST00000448065 339 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 AC092155.2-201ENST00000454675 477 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 OR4G11P-201ENST00000492842 939 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 MLLT10P2-201ENST00000506434 249 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CTDNEP1O95476 AP001804.3-201ENST00000525146 880 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 LSM6P2-201ENST00000552208 177 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 AGGF1P5-201ENST00000567900 919 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.52□□□□□ -2.01
CTDNEP1O95476 AC120349.2-201ENST00000625002 298 ntBASIC2.52□□□□□ -2.01
CTDNEP1O95476 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTDNEP1O95476 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTDNEP1O95476 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTDNEP1O95476 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 RNU6-216P-201ENST00000363282 104 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 SNORA1.3-201ENST00000384676 136 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 TMSB4XP8-201ENST00000402089 135 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AL133384.1-201ENST00000412744 351 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 TMSB4XP6-201ENST00000415187 135 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 SSR1P2-201ENST00000415208 787 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 MRPS36P1-201ENST00000421291 307 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 TMSB4XP1-201ENST00000424567 135 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 MTND2P5-201ENST00000432656 1006 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 LSM1P1-201ENST00000438629 273 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CTDNEP1O95476 AL031183.1-201ENST00000457667 207 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 PNPLA4P1-201ENST00000458328 305 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC108734.3-201ENST00000481241 1165 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 RPL30P14-201ENST00000482744 348 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 SCARNA16.3-201ENST00000516595 184 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AP001189.2-201ENST00000527320 189 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC005832.3-201ENST00000537929 631 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC125611.1-201ENST00000549563 229 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 PRELID2P1-201ENST00000552837 301 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AP005205.1-201ENST00000563503 508 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AL132657.2-201ENST00000564417 358 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC103810.1-201ENST00000579873 453 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 MIR4760-201ENST00000585040 80 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AP001269.3-201ENST00000588718 329 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AL450336.1-201ENST00000605180 586 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC006386.1-201ENST00000619436 415 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC009318.4-201ENST00000620496 486 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CTDNEP1O95476 AC012321.1-201ENST00000561622 1588 ntBASIC2.51□□□□□ -2.01
CTDNEP1O95476 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CTDNEP1O95476 AC107982.1-201ENST00000507171 1300 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CTDNEP1O95476 SNRPEP3-201ENST00000338402 276 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 Y_RNA.192-201ENST00000363977 102 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 RNU6-1180P-201ENST00000364935 107 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 SNORA72.3-201ENST00000365074 132 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 RNU6-1074P-201ENST00000383995 104 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 RNU6-413P-201ENST00000384115 107 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 MIR634-201ENST00000385208 97 ntBASIC2.5□□□□□ -2.01
CTDNEP1O95476 RPS4XP3-201ENST00000398541 413 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms