Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LRRC77P-213ENST00000637727 880 ntBASIC4.29□□□□□ -1.72
CTNND1O60716 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CTNND1O60716 AC116096.1-201ENST00000566804 2314 ntBASIC4.29□□□□□ -1.72
CTNND1O60716 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNND1O60716 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTNND1O60716 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.28□□□□□ -1.72
CTNND1O60716 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.28□□□□□ -1.72
CTNND1O60716 AC032011.1-201ENST00000611703 1549 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTNND1O60716 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
CTNND1O60716 RNU6-511P-201ENST00000363496 107 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 RNU6-1284P-201ENST00000363701 100 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTNND1O60716 RNU6-1103P-201ENST00000384150 107 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTNND1O60716 TXNP7-201ENST00000406296 293 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 BX842559.1-201ENST00000419615 532 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 MTCO2P11-201ENST00000431069 680 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 MTND3P21-201ENST00000433774 331 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 RN7SL601P-201ENST00000471221 293 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 AC023194.1-201ENST00000493084 308 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.28□□□□□ -1.72
CTNND1O60716 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.28□□□□□ -1.72
CTNND1O60716 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.28□□□□□ -1.72
CTNND1O60716 RNU2-58P-201ENST00000516403 183 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 RN7SKP244-201ENST00000516513 307 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 IGKV2D-23-201ENST00000518179 286 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.28□□□□□ -1.72
CTNND1O60716 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.28□□□□□ -1.72
CTNND1O60716 ERHP1-201ENST00000523006 310 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 FAM60DP-201ENST00000524174 632 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTNND1O60716 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.28□□□□□ -1.72
CTNND1O60716 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.28□□□□□ -1.72
CTNND1O60716 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.28□□□□□ -1.72
CTNND1O60716 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.28□□□□□ -1.72
CTNND1O60716 AL606834.2-201ENST00000602954 668 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 MIR486-1-201ENST00000612171 68 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 AL158209.2-201ENST00000619266 216 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 AC124864.2-201ENST00000624736 186 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 AC068137.3-201ENST00000639191 341 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 AC073869.6-201ENST00000640656 341 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTNND1O60716 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.28□□□□□ -1.72
CTNND1O60716 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.28□□□□□ -1.72
CTNND1O60716 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTNND1O60716 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTNND1O60716 AC008725.1-201ENST00000605123 2263 ntBASIC4.28□□□□□ -1.72
CTNND1O60716 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.28□□□□□ -1.73
CTNND1O60716 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.27□□□□□ -1.73
CTNND1O60716 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTNND1O60716 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNND1O60716 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTNND1O60716 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNND1O60716 DEFB108F-201ENST00000344638 222 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 SNORD56.2-201ENST00000363242 71 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 RNU1-33P-201ENST00000364249 162 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 RNU6-282P-201ENST00000365357 103 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTNND1O60716 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNND1O60716 AC110754.1-201ENST00000399740 601 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 USP12PX-201ENST00000432383 1057 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.27□□□□□ -1.73
CTNND1O60716 AL662791.1-201ENST00000441992 928 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC008155.2-201ENST00000464337 397 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC010631.1-201ENST00000474150 156 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC108860.1-201ENST00000484521 383 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC007182.2-201ENST00000489251 402 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.27□□□□□ -1.73
CTNND1O60716 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.27□□□□□ -1.73
CTNND1O60716 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.27□□□□□ -1.73
CTNND1O60716 AP003072.2-201ENST00000527756 676 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC008011.1-201ENST00000545989 227 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.27□□□□□ -1.73
CTNND1O60716 NCAPGP2-201ENST00000557911 754 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 MED28P6-201ENST00000558776 231 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.27□□□□□ -1.73
CTNND1O60716 AC006077.1-201ENST00000604746 343 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNND1O60716 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNND1O60716 AC004696.1-201ENST00000614345 607 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 FRG1KP-201ENST00000623592 341 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 AC091905.1-201ENST00000624400 311 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNND1O60716 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNND1O60716 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNND1O60716 AC010733.2-201ENST00000589496 5702 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNND1O60716 BDP1P-201ENST00000582658 1990 ntBASIC4.27□□□□□ -1.73
CTNND1O60716 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTNND1O60716 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNND1O60716 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTNND1O60716 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 HLFP1-201ENST00000402375 499 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 RNU2-71P-201ENST00000411395 189 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.26□□□□□ -1.73
CTNND1O60716 ATP5JP1-201ENST00000431631 322 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNND1O60716 AL451074.3-201ENST00000437709 472 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms