Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RNU6-835P-201ENST00000516974 104 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 RNU6-840P-201ENST00000517275 65 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.07□□□□□ -1.6
SMARCA5O60264 AC105029.1-201ENST00000520250 669 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 AC011979.2-201ENST00000527568 352 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.07□□□□□ -1.6
SMARCA5O60264 AC025884.1-201ENST00000556034 378 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.07□□□□□ -1.6
SMARCA5O60264 VN1R80P-201ENST00000597126 338 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 AL139395.1-201ENST00000603662 160 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.07□□□□□ -1.6
SMARCA5O60264 AC012531.5-201ENST00000611375 151 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 AC023043.4-201ENST00000612081 449 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 AL158196.1-201ENST00000616786 434 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 MIR8059-201ENST00000620427 81 ntBASIC5.07□□□□□ -1.6
SMARCA5O60264 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMARCA5O60264 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.07□□□□□ -1.6
SMARCA5O60264 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMARCA5O60264 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMARCA5O60264 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMARCA5O60264 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA5O60264 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA5O60264 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SMARCA5O60264 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.06□□□□□ -1.6
SMARCA5O60264 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.06□□□□□ -1.6
SMARCA5O60264 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA5O60264 Y_RNA.67-201ENST00000362870 100 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA5O60264 RNU1-39P-201ENST00000383897 165 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 AL122016.1-201ENST00000403365 367 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 RAB28P1-201ENST00000411517 641 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA5O60264 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA5O60264 RPL7L1P10-201ENST00000427790 463 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AC005094.1-201ENST00000440420 368 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA5O60264 RNU6-277P-201ENST00000516272 106 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 AC243972.3-201ENST00000539655 198 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 PSMA3P-201ENST00000555485 635 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 OR4H12P-201ENST00000556269 907 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.06□□□□□ -1.6
SMARCA5O60264 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AC099489.2-201ENST00000574976 260 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 MIR3671-201ENST00000580455 88 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 MIR3118-1-201ENST00000581787 76 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AC008638.3-201ENST00000603341 463 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 AL161734.1-201ENST00000609720 557 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.06□□□□□ -1.6
SMARCA5O60264 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.06□□□□□ -1.6
SMARCA5O60264 AC091953.2-201ENST00000623979 160 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.06□□□□□ -1.6
SMARCA5O60264 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA5O60264 PRO1804-201ENST00000623780 2050 ntBASIC5.06□□□□□ -1.6
SMARCA5O60264 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.06□□□□□ -1.6
SMARCA5O60264 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SMARCA5O60264 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA5O60264 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.06□□□□□ -1.6
SMARCA5O60264 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SMARCA5O60264 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SMARCA5O60264 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SMARCA5O60264 Y_RNA.166-201ENST00000363730 102 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 RNA5SP130-201ENST00000364431 114 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 RHOT1P2-201ENST00000366423 333 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 Y_RNA.481-201ENST00000384373 102 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 RPL21P24-201ENST00000413752 448 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.05□□□□□ -1.6
SMARCA5O60264 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.05□□□□□ -1.6
SMARCA5O60264 TBCAP1-201ENST00000436520 327 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 USP9YP15-201ENST00000442391 422 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 MRPL50P4-201ENST00000446432 475 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 HMGN2P7-201ENST00000456186 273 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.05□□□□□ -1.6
SMARCA5O60264 AC008481.1-201ENST00000463278 396 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMARCA5O60264 RPS27AP1-201ENST00000475545 471 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AC023194.1-201ENST00000493084 308 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AC026427.2-201ENST00000506228 536 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AC017037.1-201ENST00000508460 471 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.05□□□□□ -1.6
SMARCA5O60264 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.05□□□□□ -1.6
SMARCA5O60264 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.05□□□□□ -1.6
SMARCA5O60264 RNA5SP154-201ENST00000516193 111 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 MRPL49P2-201ENST00000521066 465 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AC008489.1-201ENST00000524271 483 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AP001804.3-201ENST00000525146 880 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMARCA5O60264 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.05□□□□□ -1.6
SMARCA5O60264 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SMARCA5O60264 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.05□□□□□ -1.6
SMARCA5O60264 AC037471.2-201ENST00000564941 598 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 AF038458.1-201ENST00000588406 262 ntBASIC5.05□□□□□ -1.6
SMARCA5O60264 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms