Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR4505-201ENST00000582238 73 ntBASIC6□□□□□ -1.45
ACTN4O43707 SNORD113-5-201ENST00000607261 78 ntBASIC6□□□□□ -1.45
ACTN4O43707 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6□□□□□ -1.45
ACTN4O43707 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6□□□□□ -1.45
ACTN4O43707 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6□□□□□ -1.45
ACTN4O43707 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6□□□□□ -1.45
ACTN4O43707 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ACTN4O43707 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.99□□□□□ -1.45
ACTN4O43707 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ACTN4O43707 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.99□□□□□ -1.45
ACTN4O43707 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ACTN4O43707 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ACTN4O43707 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ACTN4O43707 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ACTN4O43707 SNORA25.1-201ENST00000362326 128 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 RNU6-1130P-201ENST00000365434 107 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ACTN4O43707 Y_RNA.488-201ENST00000384403 102 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 AL133388.1-201ENST00000404509 287 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.99□□□□□ -1.45
ACTN4O43707 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.99□□□□□ -1.45
ACTN4O43707 COX5BP7-201ENST00000414780 274 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 AL096701.2-201ENST00000416920 238 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.99□□□□□ -1.45
ACTN4O43707 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.99□□□□□ -1.45
ACTN4O43707 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.99□□□□□ -1.45
ACTN4O43707 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.99□□□□□ -1.45
ACTN4O43707 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.99□□□□□ -1.45
ACTN4O43707 U8.22-201ENST00000459141 133 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 HMGB1P25-201ENST00000468402 607 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 AC034236.1-201ENST00000469891 373 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.99□□□□□ -1.45
ACTN4O43707 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.99□□□□□ -1.45
ACTN4O43707 ANXA2P1-201ENST00000505539 926 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.99□□□□□ -1.45
ACTN4O43707 RNU1-86P-201ENST00000516108 154 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 MIR892C-201ENST00000516410 77 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 RNU1-107P-201ENST00000516617 154 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 IGKV2D-36-201ENST00000518643 226 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.99□□□□□ -1.45
ACTN4O43707 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.99□□□□□ -1.45
ACTN4O43707 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.99□□□□□ -1.45
ACTN4O43707 RPL23AP78-201ENST00000599928 470 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 RNA5SP440-201ENST00000612665 119 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.99□□□□□ -1.45
ACTN4O43707 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
ACTN4O43707 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ACTN4O43707 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ACTN4O43707 ADAM5-202ENST00000399789 1942 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ACTN4O43707 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ACTN4O43707 AC005005.4-201ENST00000623789 16698 ntBASIC5.99□□□□□ -1.45
ACTN4O43707 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ACTN4O43707 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
ACTN4O43707 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
ACTN4O43707 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
ACTN4O43707 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.98□□□□□ -1.45
ACTN4O43707 RNU1-19P-201ENST00000363306 165 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 Y_RNA.435-201ENST00000384095 112 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 RNU6-514P-201ENST00000384208 107 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 RNU6-658P-201ENST00000384606 106 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 Y_RNA.569-201ENST00000384749 103 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 MT-TC-201ENST00000387405 66 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ACTN4O43707 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ACTN4O43707 Y_RNA.580-201ENST00000391004 95 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 AC013442.1-201ENST00000397347 228 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.98□□□□□ -1.45
ACTN4O43707 AL391219.1-201ENST00000422570 483 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 GAPDHP25-201ENST00000447061 1001 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.98□□□□□ -1.45
ACTN4O43707 AC079354.2-201ENST00000453523 154 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 AC010683.1-201ENST00000473673 378 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.98□□□□□ -1.45
ACTN4O43707 RNU7-175P-201ENST00000515915 61 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 RNY3P16-201ENST00000516338 101 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.98□□□□□ -1.45
ACTN4O43707 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ACTN4O43707 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.98□□□□□ -1.45
ACTN4O43707 RPL7P50-201ENST00000600588 727 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 AL450472.3-201ENST00000615578 367 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 RMST_4.1-201ENST00000616886 107 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.98□□□□□ -1.45
ACTN4O43707 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ACTN4O43707 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ACTN4O43707 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.98□□□□□ -1.45
ACTN4O43707 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ACTN4O43707 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ACTN4O43707 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ACTN4O43707 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.97□□□□□ -1.45
ACTN4O43707 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.97□□□□□ -1.45
ACTN4O43707 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ACTN4O43707 AL360270.2-201ENST00000562952 5985 ntBASIC5.97□□□□□ -1.45
ACTN4O43707 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.97□□□□□ -1.45
ACTN4O43707 RNU6-37P-201ENST00000362692 107 ntBASIC5.97□□□□□ -1.45
ACTN4O43707 Y_RNA.82-201ENST00000363000 102 ntBASIC5.97□□□□□ -1.45
ACTN4O43707 Y_RNA.92-201ENST00000363043 102 ntBASIC5.97□□□□□ -1.45
ACTN4O43707 RNU1-146P-201ENST00000364015 165 ntBASIC5.97□□□□□ -1.45
ACTN4O43707 RNU6-11P-201ENST00000364234 107 ntBASIC5.97□□□□□ -1.45
ACTN4O43707 Y_RNA.235-201ENST00000364412 102 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms