Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 AC008277.2-201ENST00000605196 797 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AC069200.1-201ENST00000609511 323 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AC245517.5-201ENST00000611529 162 ntBASIC3.56□□□□□ -1.84
LDB2O43679 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LDB2O43679 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LDB2O43679 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.56□□□□□ -1.84
LDB2O43679 U6.42-201ENST00000618440 107 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AC012314.7-201ENST00000619693 93 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AP003355.3-201ENST00000623465 114 ntBASIC3.56□□□□□ -1.84
LDB2O43679 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB2O43679 AC138649.5-201ENST00000637456 137 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AC244258.1-201ENST00000637553 1071 ntBASIC3.56□□□□□ -1.84
LDB2O43679 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB2O43679 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB2O43679 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 AC106871.1-201ENST00000568324 3102 ntBASIC3.56□□□□□ -1.84
LDB2O43679 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 MTND5P3-201ENST00000438536 1800 ntBASIC3.56□□□□□ -1.84
LDB2O43679 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 AC090337.1-201ENST00000579651 2074 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC244517.1-201ENST00000606030 2086 ntBASIC3.55□□□□□ -1.84
LDB2O43679 RNU6-169P-201ENST00000365336 107 ntBASIC3.55□□□□□ -1.84
LDB2O43679 RNY3P13-201ENST00000365542 102 ntBASIC3.55□□□□□ -1.84
LDB2O43679 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 Y_RNA.409-201ENST00000383990 98 ntBASIC3.55□□□□□ -1.84
LDB2O43679 Y_RNA.453-201ENST00000384223 109 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 RPS29P4-201ENST00000414733 161 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC093578.1-201ENST00000415219 368 ntBASIC3.55□□□□□ -1.84
LDB2O43679 OR1AA1P-201ENST00000419597 916 ntBASIC3.55□□□□□ -1.84
LDB2O43679 ELOCP14-201ENST00000428070 331 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB2O43679 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 HMGN2P31-201ENST00000432430 273 ntBASIC3.55□□□□□ -1.84
LDB2O43679 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 ELOCP7-201ENST00000439968 331 ntBASIC3.55□□□□□ -1.84
LDB2O43679 WASF1P1-201ENST00000447560 1131 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC007967.1-201ENST00000455422 1159 ntBASIC3.55□□□□□ -1.84
LDB2O43679 snoU13.22-201ENST00000459428 104 ntBASIC3.55□□□□□ -1.84
LDB2O43679 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB2O43679 AC092989.1-201ENST00000481235 277 ntBASIC3.55□□□□□ -1.84
LDB2O43679 FCF1P3-201ENST00000496394 590 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 PRDX4P1-201ENST00000507189 574 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC021146.1-201ENST00000511202 716 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 Y_RNA.693-201ENST00000516641 110 ntBASIC3.55□□□□□ -1.84
LDB2O43679 IGKV2D-23-201ENST00000518179 286 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 AC026333.2-201ENST00000542164 106 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB2O43679 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB2O43679 AP001429.1-201ENST00000602568 530 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC006254.3-201ENST00000603353 884 ntBASIC3.55□□□□□ -1.84
LDB2O43679 IGHV3-29-201ENST00000604817 344 ntBASIC3.55□□□□□ -1.84
LDB2O43679 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB2O43679 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB2O43679 AC019176.2-201ENST00000611579 315 ntBASIC3.55□□□□□ -1.84
LDB2O43679 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.55□□□□□ -1.84
LDB2O43679 AC084757.4-201ENST00000616350 526 ntBASIC3.55□□□□□ -1.84
LDB2O43679 AC139792.3-201ENST00000623525 224 ntBASIC3.55□□□□□ -1.84
LDB2O43679 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB2O43679 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.55□□□□□ -1.84
LDB2O43679 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.55□□□□□ -1.84
LDB2O43679 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.55□□□□□ -1.84
LDB2O43679 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDB2O43679 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
LDB2O43679 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LDB2O43679 AC138915.3-201ENST00000562908 1389 ntBASIC3.54□□□□□ -1.84
LDB2O43679 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB2O43679 RNA5SP119-201ENST00000362715 117 ntBASIC3.54□□□□□ -1.84
LDB2O43679 Y_RNA.159-201ENST00000363674 87 ntBASIC3.54□□□□□ -1.84
LDB2O43679 RNA5SP387-201ENST00000364226 106 ntBASIC3.54□□□□□ -1.84
LDB2O43679 SNORA70.4-201ENST00000365509 134 ntBASIC3.54□□□□□ -1.84
LDB2O43679 RNU6-108P-201ENST00000365558 107 ntBASIC3.54□□□□□ -1.84
LDB2O43679 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
LDB2O43679 RNU6-456P-201ENST00000384493 107 ntBASIC3.54□□□□□ -1.84
LDB2O43679 Y_RNA.573-201ENST00000384763 105 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AL136116.1-201ENST00000403591 381 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AL138878.1-201ENST00000405131 347 ntBASIC3.54□□□□□ -1.84
LDB2O43679 RNA5SP44-201ENST00000410446 133 ntBASIC3.54□□□□□ -1.84
LDB2O43679 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB2O43679 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.54□□□□□ -1.84
LDB2O43679 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB2O43679 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms