Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU2-37P-201ENST00000410695 177 ntBASIC4□□□□□ -1.77
PROM1O43490 RPL21P112-201ENST00000434403 463 ntBASIC4□□□□□ -1.77
PROM1O43490 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4□□□□□ -1.77
PROM1O43490 MTND1P9-201ENST00000453775 944 ntBASIC4□□□□□ -1.77
PROM1O43490 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4□□□□□ -1.77
PROM1O43490 AC146944.2-203ENST00000502493 354 ntBASIC4□□□□□ -1.77
PROM1O43490 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4□□□□□ -1.77
PROM1O43490 AC103851.1-201ENST00000506833 274 ntBASIC4□□□□□ -1.77
PROM1O43490 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4□□□□□ -1.77
PROM1O43490 AC139495.1-202ENST00000513164 354 ntBASIC4□□□□□ -1.77
PROM1O43490 RNU4-29P-201ENST00000515943 174 ntBASIC4□□□□□ -1.77
PROM1O43490 SNORD27.1-201ENST00000516319 72 ntBASIC4□□□□□ -1.77
PROM1O43490 RNU2-10P-201ENST00000516375 211 ntBASIC4□□□□□ -1.77
PROM1O43490 RNA5SP519-201ENST00000516480 119 ntBASIC4□□□□□ -1.77
PROM1O43490 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4□□□□□ -1.77
PROM1O43490 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4□□□□□ -1.77
PROM1O43490 AC103843.2-201ENST00000530523 682 ntBASIC4□□□□□ -1.77
PROM1O43490 OR5D17P-201ENST00000531492 978 ntBASIC4□□□□□ -1.77
PROM1O43490 CYCSP29-201ENST00000533731 318 ntBASIC4□□□□□ -1.77
PROM1O43490 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4□□□□□ -1.77
PROM1O43490 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4□□□□□ -1.77
PROM1O43490 AC010591.1-201ENST00000603941 649 ntBASIC4□□□□□ -1.77
PROM1O43490 HMGN2P28-201ENST00000606102 262 ntBASIC4□□□□□ -1.77
PROM1O43490 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4□□□□□ -1.77
PROM1O43490 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4□□□□□ -1.77
PROM1O43490 DLEU1_1.1-201ENST00000618107 190 ntBASIC4□□□□□ -1.77
PROM1O43490 AL445567.2-201ENST00000618935 498 ntBASIC4□□□□□ -1.77
PROM1O43490 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4□□□□□ -1.77
PROM1O43490 MIR1302-1-201ENST00000637932 143 ntBASIC4□□□□□ -1.77
PROM1O43490 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4□□□□□ -1.77
PROM1O43490 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4□□□□□ -1.77
PROM1O43490 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PROM1O43490 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PROM1O43490 AL353746.1-201ENST00000566293 6881 ntBASIC4□□□□□ -1.77
PROM1O43490 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PROM1O43490 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.99□□□□□ -1.77
PROM1O43490 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 RNU6-335P-201ENST00000364563 113 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MIR454-201ENST00000390180 115 ntBASIC3.99□□□□□ -1.77
PROM1O43490 RNU11-4P-201ENST00000391149 133 ntBASIC3.99□□□□□ -1.77
PROM1O43490 RNU6-510P-201ENST00000391239 108 ntBASIC3.99□□□□□ -1.77
PROM1O43490 RPS26P8-201ENST00000393490 348 ntBASIC3.99□□□□□ -1.77
PROM1O43490 RNU6-516P-201ENST00000411381 104 ntBASIC3.99□□□□□ -1.77
PROM1O43490 CYP4F29P-201ENST00000420685 446 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.99□□□□□ -1.77
PROM1O43490 MED13P1-201ENST00000428342 171 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MTATP6P16-201ENST00000434543 526 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.99□□□□□ -1.77
PROM1O43490 RPS17P13-201ENST00000448974 407 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MTND3P16-201ENST00000452205 344 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.99□□□□□ -1.77
PROM1O43490 RPS29P19-201ENST00000479709 171 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC092451.1-201ENST00000480211 153 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
PROM1O43490 AC116562.3-201ENST00000506136 177 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC004062.1-201ENST00000509926 645 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC105417.1-201ENST00000514691 285 ntBASIC3.99□□□□□ -1.77
PROM1O43490 RN7SKP116-201ENST00000516902 319 ntBASIC3.99□□□□□ -1.77
PROM1O43490 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.99□□□□□ -1.77
PROM1O43490 SUMO2P20-201ENST00000520803 283 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MRPL49P2-201ENST00000521066 465 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.99□□□□□ -1.77
PROM1O43490 AC068587.5-201ENST00000528506 175 ntBASIC3.99□□□□□ -1.77
PROM1O43490 OR5BN1P-201ENST00000532955 829 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC087241.2-201ENST00000535801 324 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 BNIP3P6-201ENST00000549284 499 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.99□□□□□ -1.77
PROM1O43490 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.99□□□□□ -1.77
PROM1O43490 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.99□□□□□ -1.77
PROM1O43490 AL133153.1-201ENST00000557756 303 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.99□□□□□ -1.77
PROM1O43490 MIR4429-201ENST00000580105 73 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.99□□□□□ -1.77
PROM1O43490 IPO5P1-202ENST00000600039 287 ntBASIC3.99□□□□□ -1.77
PROM1O43490 SNRPGP15-201ENST00000600149 222 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AL355812.1-201ENST00000603215 216 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MIR432-201ENST00000606207 94 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MIR7702-201ENST00000621931 59 ntBASIC3.99□□□□□ -1.77
PROM1O43490 TPTEP1-208ENST00000636884 213 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.99□□□□□ -1.77
PROM1O43490 MTCO1P9-201ENST00000505577 1534 ntBASIC3.99□□□□□ -1.77
PROM1O43490 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PROM1O43490 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.99□□□□□ -1.77
PROM1O43490 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.99□□□□□ -1.77
PROM1O43490 MTND4P35-201ENST00000604257 1375 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms