Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 NOTCH2P1-201ENST00000443481 624 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF3O43395 AC020550.1-201ENST00000447385 163 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF3O43395 PSPHP1-201ENST00000450062 261 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 HMGN2P16-201ENST00000456802 261 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF3O43395 AC023598.1-201ENST00000472521 361 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF3O43395 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF3O43395 UBE2CP3-201ENST00000502715 450 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF3O43395 SNORA70.16-201ENST00000516390 95 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF3O43395 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF3O43395 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF3O43395 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.27□□□□□ -1.73
PRPF3O43395 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF3O43395 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
PRPF3O43395 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF3O43395 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF3O43395 AP002360.4-201ENST00000606980 481 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF3O43395 AC012531.5-201ENST00000611375 151 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF3O43395 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF3O43395 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF3O43395 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
PRPF3O43395 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
PRPF3O43395 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
PRPF3O43395 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF3O43395 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF3O43395 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.26□□□□□ -1.73
PRPF3O43395 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF3O43395 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF3O43395 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF3O43395 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF3O43395 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF3O43395 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF3O43395 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PRPF3O43395 MIR181A1-201ENST00000385026 110 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 HMGB3P20-201ENST00000417997 600 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF3O43395 ISCA1P1-201ENST00000426679 387 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF3O43395 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF3O43395 AC122718.1-201ENST00000439448 744 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.26□□□□□ -1.73
PRPF3O43395 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF3O43395 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF3O43395 AC013267.1-201ENST00000458227 267 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 FAM133DP-201ENST00000464802 691 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 RPS20P22-201ENST00000473700 357 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 RPL9P33-201ENST00000484311 566 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF3O43395 SAP18P1-201ENST00000512058 390 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF3O43395 RN7SKP83-201ENST00000516512 178 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 AC016957.1-201ENST00000534895 309 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF3O43395 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.26□□□□□ -1.73
PRPF3O43395 AC124947.2-202ENST00000552735 133 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF3O43395 AC244505.7-201ENST00000599675 272 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.26□□□□□ -1.73
PRPF3O43395 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF3O43395 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF3O43395 AC068880.5-201ENST00000624331 290 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 AC009161.2-201ENST00000624626 138 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 AP000553.6-201ENST00000641242 118 ntBASIC4.26□□□□□ -1.73
PRPF3O43395 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF3O43395 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF3O43395 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PRPF3O43395 RNU6-181P-201ENST00000363225 107 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 RN7SKP226-201ENST00000364912 300 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF3O43395 Y_RNA.481-201ENST00000384373 102 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 MTHFD2P2-201ENST00000407725 247 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 CYCSP19-201ENST00000411715 316 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 RHEBP3-201ENST00000411920 351 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF3O43395 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF3O43395 AL451054.2-201ENST00000420896 202 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 AC245054.1-201ENST00000420944 258 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 AL358934.1-201ENST00000432346 324 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 HMGB3P12-201ENST00000438745 556 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF3O43395 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF3O43395 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF3O43395 RNU6-927P-201ENST00000516199 100 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 RNU6-445P-201ENST00000516949 107 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 RNA5SP291-201ENST00000517222 105 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 RN7SKP289-201ENST00000517244 295 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 AC090572.1-201ENST00000519251 160 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF3O43395 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF3O43395 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF3O43395 AL359212.1-201ENST00000556608 614 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 GLUD1P4-201ENST00000590914 418 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms