Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 AL590002.1-201ENST00000406554 418 ntBASIC3.9□□□□□ -1.79
CTIFO43310 RN7SKP263-201ENST00000411194 309 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.9□□□□□ -1.79
CTIFO43310 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.9□□□□□ -1.79
CTIFO43310 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.9□□□□□ -1.79
CTIFO43310 MTCO2P19-201ENST00000427513 598 ntBASIC3.9□□□□□ -1.79
CTIFO43310 TIMM9P3-201ENST00000428659 274 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.9□□□□□ -1.79
CTIFO43310 AC002486.1-201ENST00000435098 391 ntBASIC3.9□□□□□ -1.79
CTIFO43310 HMGB1P31-201ENST00000437242 427 ntBASIC3.9□□□□□ -1.79
CTIFO43310 MTATP6P30-201ENST00000443540 664 ntBASIC3.9□□□□□ -1.79
CTIFO43310 NFU1P2-201ENST00000448700 469 ntBASIC3.9□□□□□ -1.79
CTIFO43310 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.9□□□□□ -1.79
CTIFO43310 UQCRHP4-201ENST00000471686 272 ntBASIC3.9□□□□□ -1.79
CTIFO43310 RPS3AP14-201ENST00000483907 780 ntBASIC3.9□□□□□ -1.79
CTIFO43310 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTIFO43310 AC023194.1-201ENST00000493084 308 ntBASIC3.9□□□□□ -1.79
CTIFO43310 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.9□□□□□ -1.79
CTIFO43310 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.9□□□□□ -1.79
CTIFO43310 MTCO1P35-201ENST00000515270 228 ntBASIC3.9□□□□□ -1.79
CTIFO43310 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTIFO43310 SNORA31.9-201ENST00000516429 84 ntBASIC3.9□□□□□ -1.79
CTIFO43310 SNORA64.4-201ENST00000516632 81 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AC022616.3-201ENST00000523940 148 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AC011979.2-201ENST00000527568 352 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AC118273.2-201ENST00000532092 465 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.9□□□□□ -1.79
CTIFO43310 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.9□□□□□ -1.79
CTIFO43310 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.9□□□□□ -1.79
CTIFO43310 SNRPGP15-201ENST00000600149 222 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AC091167.4-201ENST00000605079 184 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.9□□□□□ -1.79
CTIFO43310 AL590282.1-201ENST00000610379 1136 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AL603758.1-201ENST00000618654 241 ntBASIC3.9□□□□□ -1.79
CTIFO43310 AL359880.1-201ENST00000621879 266 ntBASIC3.9□□□□□ -1.79
CTIFO43310 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.9□□□□□ -1.79
CTIFO43310 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CTIFO43310 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CTIFO43310 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTIFO43310 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.89□□□□□ -1.79
CTIFO43310 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTIFO43310 AC007823.1-201ENST00000569932 1566 ntBASIC3.89□□□□□ -1.79
CTIFO43310 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTIFO43310 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTIFO43310 Y_RNA.1-201ENST00000352915 104 ntBASIC3.89□□□□□ -1.79
CTIFO43310 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CTIFO43310 RNA5SP383-201ENST00000362934 120 ntBASIC3.89□□□□□ -1.79
CTIFO43310 SNORD56.3-201ENST00000363507 71 ntBASIC3.89□□□□□ -1.79
CTIFO43310 RNA5SP515-201ENST00000364570 118 ntBASIC3.89□□□□□ -1.79
CTIFO43310 RNU6-282P-201ENST00000365357 103 ntBASIC3.89□□□□□ -1.79
CTIFO43310 RNA5SP366-201ENST00000365454 123 ntBASIC3.89□□□□□ -1.79
CTIFO43310 RNU6-1074P-201ENST00000383995 104 ntBASIC3.89□□□□□ -1.79
CTIFO43310 SNORA57.1-201ENST00000391227 145 ntBASIC3.89□□□□□ -1.79
CTIFO43310 MIR1277-201ENST00000408536 78 ntBASIC3.89□□□□□ -1.79
CTIFO43310 RNU2-43P-201ENST00000410306 190 ntBASIC3.89□□□□□ -1.79
CTIFO43310 RNU4-65P-201ENST00000410473 140 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.89□□□□□ -1.79
CTIFO43310 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTIFO43310 RPL23AP38-201ENST00000423801 469 ntBASIC3.89□□□□□ -1.79
CTIFO43310 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.89□□□□□ -1.79
CTIFO43310 BTF3P10-201ENST00000433415 495 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.89□□□□□ -1.79
CTIFO43310 AC009969.1-201ENST00000438726 172 ntBASIC3.89□□□□□ -1.79
CTIFO43310 HMGN1P18-201ENST00000457642 277 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AL049714.1-201ENST00000466686 347 ntBASIC3.89□□□□□ -1.79
CTIFO43310 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AC091167.1-201ENST00000492017 396 ntBASIC3.89□□□□□ -1.79
CTIFO43310 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTIFO43310 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.89□□□□□ -1.79
CTIFO43310 AC074344.1-201ENST00000512823 224 ntBASIC3.89□□□□□ -1.79
CTIFO43310 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.89□□□□□ -1.79
CTIFO43310 MIR2116-201ENST00000517221 80 ntBASIC3.89□□□□□ -1.79
CTIFO43310 MRPL49P2-201ENST00000521066 465 ntBASIC3.89□□□□□ -1.79
CTIFO43310 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.89□□□□□ -1.79
CTIFO43310 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.89□□□□□ -1.79
CTIFO43310 AK6P1-201ENST00000540219 478 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.89□□□□□ -1.79
CTIFO43310 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.89□□□□□ -1.79
CTIFO43310 AL121579.1-201ENST00000555129 305 ntBASIC3.89□□□□□ -1.79
CTIFO43310 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.89□□□□□ -1.79
CTIFO43310 AC006504.3-201ENST00000586818 523 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.89□□□□□ -1.79
CTIFO43310 AP000907.4-201ENST00000604143 237 ntBASIC3.89□□□□□ -1.79
CTIFO43310 LARP7P1-201ENST00000605576 316 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AC107294.3-201ENST00000609211 526 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.89□□□□□ -1.79
CTIFO43310 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.89□□□□□ -1.79
CTIFO43310 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AC110801.1-201ENST00000623590 212 ntBASIC3.89□□□□□ -1.79
CTIFO43310 MIR3653-201ENST00000625572 110 ntBASIC3.89□□□□□ -1.79
CTIFO43310 AC099654.14-201ENST00000638599 341 ntBASIC3.89□□□□□ -1.79
CTIFO43310 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.89□□□□□ -1.79
CTIFO43310 DDX10P1-201ENST00000448545 1933 ntBASIC3.89□□□□□ -1.79
CTIFO43310 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CTIFO43310 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTIFO43310 AC004925.1-201ENST00000624256 2706 ntBASIC3.88□□□□□ -1.79
CTIFO43310 AL355596.1-201ENST00000565399 3996 ntBASIC3.88□□□□□ -1.79
CTIFO43310 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTIFO43310 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.88□□□□□ -1.79
CTIFO43310 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms