Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC011477.1-204ENST00000623416 1325 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGB3O15347 WWP1P1-201ENST00000466609 2769 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
HMGB3O15347 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGB3O15347 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGB3O15347 RNU6-76P-201ENST00000384060 104 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 RNU6-878P-201ENST00000384578 110 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 RNU6-750P-201ENST00000390946 107 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 HMGB1P17-201ENST00000403495 628 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 RPL17P12-201ENST00000413391 526 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB3O15347 ZNF90P2-204ENST00000419323 1075 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGB3O15347 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB3O15347 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AC019097.1-201ENST00000424783 735 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AC063976.3-201ENST00000426849 329 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 PSMA6P3-201ENST00000428242 164 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 OR10R1P-201ENST00000441524 1141 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AC124916.1-201ENST00000444020 547 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGB3O15347 RN7SL636P-201ENST00000497504 294 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 COX7A2P2-201ENST00000505291 250 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.66□□□□□ -2.14
HMGB3O15347 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGB3O15347 SNORA31.22-201ENST00000517204 135 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB3O15347 AC124947.2-202ENST00000552735 133 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB3O15347 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB3O15347 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 AC027176.1-201ENST00000560204 514 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB3O15347 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 MIR4444-1-201ENST00000581696 74 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 MIR4444-2-201ENST00000584390 74 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AL671309.1-201ENST00000603750 544 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 TUG1_1.1-201ENST00000610654 145 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 MIR6817-201ENST00000615588 66 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 MIR6075-201ENST00000620782 95 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.66□□□□□ -2.14
HMGB3O15347 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB3O15347 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
HMGB3O15347 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMGB3O15347 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGB3O15347 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGB3O15347 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGB3O15347 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGB3O15347 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.14
HMGB3O15347 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGB3O15347 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGB3O15347 RNA5SP68-201ENST00000363885 119 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 RNU1-148P-201ENST00000384472 162 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HMGB3O15347 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.65□□□□□ -2.15
HMGB3O15347 AL139098.1-201ENST00000407291 389 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGB3O15347 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGB3O15347 KRR1P1-201ENST00000419430 803 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGB3O15347 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGB3O15347 AC004383.1-201ENST00000438135 289 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 THAP5P1-201ENST00000439089 262 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 SDCBPP1-201ENST00000440192 890 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 USP9YP8-201ENST00000441913 500 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 AC025750.2-201ENST00000442609 450 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.65□□□□□ -2.15
HMGB3O15347 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGB3O15347 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGB3O15347 AC096571.1-202ENST00000506634 735 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.65□□□□□ -2.15
HMGB3O15347 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGB3O15347 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGB3O15347 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGB3O15347 AC007229.1-201ENST00000590455 412 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 AL161729.4-201ENST00000604650 476 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 AC008498.1-201ENST00000613012 531 ntBASIC1.65□□□□□ -2.15
HMGB3O15347 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGB3O15347 GNG5P1-201ENST00000255500 204 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HMGB3O15347 RNU6-1083P-201ENST00000384022 107 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 SNORD116-23-201ENST00000384645 92 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 MIR514A1-201ENST00000385133 98 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMGB3O15347 RNA5SP270-201ENST00000411361 118 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AL030996.1-201ENST00000411430 235 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGB3O15347 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGB3O15347 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGB3O15347 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.64□□□□□ -2.15
HMGB3O15347 AL050341.1-201ENST00000447743 313 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms