Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH17O14917 PPIAP15-201ENST00000479662 484 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 AC105914.1-201ENST00000511798 226 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH17O14917 RNU7-143P-201ENST00000516781 65 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 IGKV2D-19-201ENST00000523346 262 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH17O14917 AL512310.1-201ENST00000548639 172 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 AC055876.1-202ENST00000567053 138 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 RPL23AP87-202ENST00000573039 466 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH17O14917 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH17O14917 AL606490.9-201ENST00000603331 271 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 AL391646.1-201ENST00000603860 190 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 AC007363.1-201ENST00000604736 620 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 AC128687.2-201ENST00000609657 566 ntBASIC3.79□□□□□ -1.8
PCDH17O14917 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDH17O14917 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH17O14917 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH17O14917 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PCDH17O14917 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH17O14917 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH17O14917 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH17O14917 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH17O14917 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH17O14917 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PCDH17O14917 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH17O14917 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH17O14917 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH17O14917 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH17O14917 Y_RNA.9-201ENST00000362354 101 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 RNU6-1085P-201ENST00000363576 107 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 RNU6-960P-201ENST00000364056 120 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 RNU1-39P-201ENST00000383897 165 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 RNA5SP129-201ENST00000410276 118 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH17O14917 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH17O14917 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH17O14917 HMGB1P12-201ENST00000438594 598 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH17O14917 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH17O14917 RPS4XP4-201ENST00000443195 763 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 RPL23AP20-201ENST00000447965 421 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 RPL21P11-201ENST00000461458 483 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 AC117522.1-201ENST00000509821 380 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 MTND4LP26-201ENST00000518144 282 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH17O14917 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH17O14917 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH17O14917 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH17O14917 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH17O14917 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH17O14917 RPS3AP4-201ENST00000555161 764 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH17O14917 NCAPGP2-201ENST00000557911 754 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH17O14917 AC027807.1-201ENST00000559921 996 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH17O14917 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH17O14917 Z84480.1-201ENST00000605131 311 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDH17O14917 AC017083.3-201ENST00000609955 700 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PCDH17O14917 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDH17O14917 AL391261.4-201ENST00000616012 481 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 AL160394.1-201ENST00000624765 724 ntBASIC3.78□□□□□ -1.8
PCDH17O14917 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH17O14917 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH17O14917 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH17O14917 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH17O14917 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH17O14917 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PCDH17O14917 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH17O14917 ELF2P3-201ENST00000445099 1506 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH17O14917 MIR514A1-201ENST00000385133 98 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 CIR1P3-201ENST00000405137 479 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 NDUFS5P1-201ENST00000405668 289 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH17O14917 AC018630.2-202ENST00000422992 927 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 USP9YP18-201ENST00000425912 695 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 AL590383.1-201ENST00000428602 75 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDH17O14917 AL358472.1-201ENST00000431295 329 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 AC087650.1-201ENST00000431445 468 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 RPL23AP30-201ENST00000432419 501 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 UBE2V1P8-201ENST00000437166 265 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 AL356535.1-201ENST00000440335 398 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 TXNP1-201ENST00000441872 371 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 AC020550.1-201ENST00000447385 163 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 GAPDHP27-201ENST00000447427 1020 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH17O14917 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH17O14917 RPS20P20-201ENST00000460498 340 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 RPL7L1P8-201ENST00000469911 741 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PCDH17O14917 AL049874.1-201ENST00000489560 388 ntBASIC3.77□□□□□ -1.81
PCDH17O14917 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms