Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AP004217.1-201ENST00000480579 346 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 OR5BM1P-201ENST00000512021 366 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.9□□□□□ -1.95
SLC28A1O00337 RNU6-390P-201ENST00000516259 103 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 RN7SKP287-201ENST00000516546 266 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 SNORA67.7-201ENST00000516664 135 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 RNU6-678P-201ENST00000516832 109 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC28A1O00337 AP000907.2-201ENST00000530827 353 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.9□□□□□ -1.95
SLC28A1O00337 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.9□□□□□ -1.95
SLC28A1O00337 TRAV28-201ENST00000557548 323 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 MIR5680-201ENST00000577577 84 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 AP001004.1-201ENST00000582468 324 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC28A1O00337 AL606834.2-201ENST00000602954 668 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 AC068790.3-201ENST00000602988 553 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 AC079395.3-201ENST00000615161 484 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 AC012150.2-201ENST00000621300 544 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 AC084035.1-201ENST00000634543 607 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 U6.105-201ENST00000637379 88 ntBASIC2.9□□□□□ -1.95
SLC28A1O00337 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
SLC28A1O00337 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.9□□□□□ -1.95
SLC28A1O00337 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SLC28A1O00337 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC28A1O00337 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SLC28A1O00337 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC28A1O00337 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC28A1O00337 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SLC28A1O00337 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 MIR22-201ENST00000362190 85 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 RNU6-270P-201ENST00000364131 105 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 RNU6-660P-201ENST00000364566 109 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC28A1O00337 MIR7-3-201ENST00000384898 110 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AC119751.3-201ENST00000399720 670 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AL031121.1-201ENST00000406553 254 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AL513331.1-201ENST00000411908 397 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 RPL21P24-201ENST00000413752 448 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 AC005300.1-201ENST00000428401 373 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 ELOCP30-201ENST00000447108 299 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC28A1O00337 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC28A1O00337 AC092798.1-201ENST00000458542 409 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 LINC00888-204ENST00000487386 421 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AC055855.1-201ENST00000489563 579 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC28A1O00337 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC28A1O00337 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AC007536.1-201ENST00000533382 349 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AC091564.4-201ENST00000533934 2194 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SLC28A1O00337 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC28A1O00337 ELOCP35-201ENST00000604289 336 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AC107214.2-201ENST00000608204 634 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AC004696.1-201ENST00000614345 607 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AL161629.2-201ENST00000615347 275 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 MIR7975-201ENST00000619350 68 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AC007318.2-201ENST00000620999 243 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 AP000676.4-201ENST00000624659 623 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC28A1O00337 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC28A1O00337 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC28A1O00337 GABRG2-229ENST00000641017 3628 ntBASIC2.89□□□□□ -1.95
SLC28A1O00337 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC28A1O00337 AC022336.2-201ENST00000568966 2538 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC28A1O00337 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC28A1O00337 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC28A1O00337 RNY4P24-201ENST00000362735 96 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 RNA5SP139-201ENST00000364340 117 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 RPL5P18-201ENST00000406671 891 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 RPL23AP39-201ENST00000415533 405 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 VPS26BP1-201ENST00000417155 755 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 AC005326.1-201ENST00000429197 123 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 USP12PX-201ENST00000432383 1057 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.88□□□□□ -1.95
SLC28A1O00337 BNIP3P2-201ENST00000441221 577 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 PIGFP3-201ENST00000441918 722 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 VN1R34P-201ENST00000447387 883 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 PRDX3P3-201ENST00000447765 522 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 RPL21P41-201ENST00000459863 264 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 RPL23AP41-201ENST00000484754 458 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 AC112673.1-201ENST00000513168 575 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms