Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
AP3B1O00203 RNU6-637P-201ENST00000384050 107 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 SNORA18.3-201ENST00000384122 132 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 MIR888-201ENST00000401186 77 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 AL109755.1-201ENST00000401791 649 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 RNU2-33P-201ENST00000410344 192 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.66□□□□□ -1.98
AP3B1O00203 RPS12P2-201ENST00000439728 269 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 AC002381.1-201ENST00000447049 280 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.66□□□□□ -1.98
AP3B1O00203 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.66□□□□□ -1.98
AP3B1O00203 AC107626.1-201ENST00000471084 183 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
AP3B1O00203 RPL36AP51-201ENST00000487216 318 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.66□□□□□ -1.98
AP3B1O00203 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 RNU6-1225P-201ENST00000516336 65 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 BTF3P12-201ENST00000519620 469 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.66□□□□□ -1.98
AP3B1O00203 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
AP3B1O00203 NDUFS5P6-201ENST00000529136 295 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.66□□□□□ -1.98
AP3B1O00203 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.66□□□□□ -1.98
AP3B1O00203 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.66□□□□□ -1.98
AP3B1O00203 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 BNIP3P33-201ENST00000598912 569 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
AP3B1O00203 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
AP3B1O00203 DDX10P1-201ENST00000448545 1933 ntBASIC2.66□□□□□ -1.98
AP3B1O00203 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
AP3B1O00203 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
AP3B1O00203 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
AP3B1O00203 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
AP3B1O00203 RNU1-112P-201ENST00000364401 164 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 RPS4XP7-201ENST00000406274 780 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 RPLP0P7-201ENST00000416050 667 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 MRPS36P1-201ENST00000421291 307 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 RPS15AP5-201ENST00000436276 388 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.65□□□□□ -1.99
AP3B1O00203 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.65□□□□□ -1.99
AP3B1O00203 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.65□□□□□ -1.99
AP3B1O00203 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.65□□□□□ -1.99
AP3B1O00203 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.65□□□□□ -1.99
AP3B1O00203 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.99
AP3B1O00203 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.65□□□□□ -1.99
AP3B1O00203 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 RNU6-583P-201ENST00000516012 92 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 SNORA70.24-201ENST00000517233 118 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 HMGB1P41-201ENST00000520234 440 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 AC100870.1-201ENST00000522035 505 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.65□□□□□ -1.99
AP3B1O00203 AC002545.1-201ENST00000592511 181 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.65□□□□□ -1.99
AP3B1O00203 OR10AB1P-201ENST00000609613 938 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 FTX_3.1-201ENST00000610451 147 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 HMGB1P24-202ENST00000615653 685 ntBASIC2.65□□□□□ -1.99
AP3B1O00203 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.65□□□□□ -1.99
AP3B1O00203 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
AP3B1O00203 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
AP3B1O00203 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.64□□□□□ -1.99
AP3B1O00203 AL079343.1-201ENST00000572358 1771 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
AP3B1O00203 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
AP3B1O00203 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
AP3B1O00203 MIR208A-201ENST00000362287 71 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 MIR524-201ENST00000385242 87 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 AL360182.1-201ENST00000397433 468 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 AC023141.4-201ENST00000412031 328 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 RPS3AP12-201ENST00000443616 753 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.64□□□□□ -1.99
AP3B1O00203 OSTCP8-201ENST00000445117 448 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.64□□□□□ -1.99
AP3B1O00203 AC108734.3-201ENST00000481241 1165 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.64□□□□□ -1.99
AP3B1O00203 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.64□□□□□ -1.99
AP3B1O00203 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 RNU5F-8P-201ENST00000515941 111 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 OR4R1P-201ENST00000529879 463 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.64□□□□□ -1.99
AP3B1O00203 AC123904.3-201ENST00000547218 814 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.64□□□□□ -1.99
AP3B1O00203 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.64□□□□□ -1.99
AP3B1O00203 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.64□□□□□ -1.99
AP3B1O00203 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.64□□□□□ -1.99
AP3B1O00203 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.64□□□□□ -1.99
AP3B1O00203 MTND1P37-201ENST00000636562 264 ntBASIC2.64□□□□□ -1.99
AP3B1O00203 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.64□□□□□ -1.99
AP3B1O00203 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
AP3B1O00203 ZNF271P-202ENST00000465539 1970 ntBASIC2.63□□□□□ -1.99
AP3B1O00203 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.63□□□□□ -1.99
AP3B1O00203 MTND4P27-201ENST00000450813 1354 ntBASIC2.63□□□□□ -1.99
AP3B1O00203 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.63□□□□□ -1.99
AP3B1O00203 FTLP6-201ENST00000355274 422 ntBASIC2.63□□□□□ -1.99
AP3B1O00203 SNORA63.3-201ENST00000362682 132 ntBASIC2.63□□□□□ -1.99
AP3B1O00203 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.63□□□□□ -1.99
AP3B1O00203 MTCO1P56-201ENST00000401674 224 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms