Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL356266.1-201ENST00000623311 483 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AP003399.1-201ENST00000637534 361 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC233263.6-201ENST00000631132 1963 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 Y_RNA.318-201ENST00000365131 97 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 SNORA48.5-201ENST00000391143 135 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 MIR1290-201ENST00000408735 78 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AC096664.2-201ENST00000411843 406 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 USP9YP33-201ENST00000412220 421 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL365203.2-201ENST00000423444 196 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL590233.1-201ENST00000430017 456 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AC024082.2-201ENST00000434771 238 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 USP9YP35-201ENST00000435696 412 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 GAPDHP27-201ENST00000447427 1020 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 EPS15P1-201ENST00000448836 336 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 ZNF114P1-201ENST00000453500 292 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL359385.1-201ENST00000456509 365 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 RPL30P9-201ENST00000465586 330 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 SETP11-201ENST00000473027 690 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 HMGB1P36-201ENST00000487709 576 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AC023424.2-201ENST00000493479 777 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AC080014.1-201ENST00000496877 1201 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AC104685.1-201ENST00000502445 371 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 XKRY-201ENST00000510392 1100 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 RNU6-150P-201ENST00000516237 95 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 HSPA8P13-201ENST00000523715 472 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL133271.1-201ENST00000538229 291 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 ROCK1P1-201ENST00000573767 549 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 MIR3921-201ENST00000577308 85 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL592221.1-201ENST00000605266 382 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 AL603755.1-201ENST00000619504 163 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 MTND4P16-201ENST00000466108 1367 ntBASIC3.11□□□□□ -1.91
TRIM49BA6NDI0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC008568.2-201ENST00000623862 2313 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC005539.1-201ENST00000443768 1479 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 FRG1BP-201ENST00000278882 761 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AL592148.1-201ENST00000413568 445 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 NPM1P11-201ENST00000417106 855 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 RPL7P46-201ENST00000425129 740 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC022018.1-201ENST00000430685 241 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 TRIM60P18-201ENST00000441518 828 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC005297.2-201ENST00000450430 606 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC093392.2-201ENST00000450682 337 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC090453.1-201ENST00000495560 436 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC114981.1-201ENST00000503897 678 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC005178.1-201ENST00000508392 440 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 RNU6-583P-201ENST00000516012 92 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC103783.1-201ENST00000520506 373 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC022861.1-201ENST00000522981 663 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 MTCO1P47-201ENST00000523889 1271 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 ISCA1P3-201ENST00000577104 373 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AP000811.1-201ENST00000603803 651 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AL031667.3-201ENST00000620124 655 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC091931.1-201ENST00000623488 728 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 MIR6733-201ENST00000635723 61 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 MAPK10-322ENST00000641485 4530 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AL356473.1-201ENST00000406203 1408 ntBASIC3.1□□□□□ -1.91
TRIM49BA6NDI0 AC009812.4-201ENST00000569134 1805 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms