Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AC118465.1-201ENST00000513820 1271 ntBASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AC104057.1-201ENST00000515547 497 ntBASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 RNU2-19P-201ENST00000517288 84 ntBASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AC090312.2-201ENST00000582687 378 ntBASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 MIR4672-201ENST00000583126 81 ntBASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AC135507.1-201ENST00000607214 561 ntBASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AC103710.2-201ENST00000609912 942 ntBASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 ADAM3A-203ENST00000461344 2157 ntBASIC1.41□□□□□ -2.18
TCRBV3S1A0A5B6 NUP58P1-201ENST00000502546 1738 ntBASIC1.4□□□□□ -2.18
TCRBV3S1A0A5B6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.4□□□□□ -2.18
TCRBV3S1A0A5B6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 SNORA40.18-201ENST00000391200 128 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 SSXP10-201ENST00000402595 565 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 RNA5SP270-201ENST00000411361 118 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 EZH2P1-201ENST00000431167 291 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC090774.1-201ENST00000435925 246 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC093155.1-201ENST00000440164 826 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 snoU13.28-201ENST00000459235 104 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AP001486.1-201ENST00000463339 476 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC023141.11-201ENST00000508864 202 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 Y_RNA.675-201ENST00000516389 149 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AL442163.2-201ENST00000553912 710 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC025165.5-201ENST00000602802 578 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC013468.1-201ENST00000608680 598 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AC239803.2-201ENST00000610161 430 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AL590808.1-201ENST00000618696 141 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 AP006248.3-201ENST00000623580 594 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 MTND2P41-201ENST00000637599 773 ntBASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TCRBV3S1A0A5B6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC006026.1-201ENST00000444025 1803 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 RNU6-270P-201ENST00000364131 105 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 RNU4-42P-201ENST00000364738 142 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 RNU6-821P-201ENST00000390995 107 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AL136372.1-201ENST00000403060 228 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 RNU4-74P-201ENST00000411280 161 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC098614.2-201ENST00000426040 255 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 OR52A4P-202ENST00000481634 799 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 SUMO1P1-201ENST00000497904 306 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC008885.2-201ENST00000509506 930 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC005498.1-201ENST00000592125 465 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC012669.1-201ENST00000603209 283 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC090116.1-201ENST00000615679 446 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AC064859.1-201ENST00000624741 174 ntBASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.39□□□□□ -2.19
TCRBV3S1A0A5B6 MTND4P23-201ENST00000447723 1363 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 RNU6-386P-201ENST00000362650 107 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 RN7SKP51-201ENST00000410781 304 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AC092745.2-202ENST00000411880 369 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 GTF2IP7-202ENST00000436677 309 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 HMGB1P18-201ENST00000438801 619 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AC004865.1-201ENST00000442276 1003 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 SSXP1-201ENST00000453640 473 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 SNORA31.25-201ENST00000517242 134 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AC025857.1-201ENST00000525252 377 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 ARL2BPP2-201ENST00000550907 489 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 HMGB1P14-201ENST00000557424 591 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AC078899.2-201ENST00000595282 212 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AC025588.3-201ENST00000604182 274 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 MIR502-201ENST00000606349 86 ntBASIC1.38□□□□□ -2.19
TCRBV3S1A0A5B6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms