Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AL512637.2-201ENST00000431287 1256 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC241584.1-201ENST00000438469 1241 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 FGF7P5-201ENST00000441829 291 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 GPM6BP3-201ENST00000442797 145 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC009237.8-201ENST00000445492 379 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AL136380.1-201ENST00000447970 162 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 RNA5SP233-201ENST00000459153 113 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 RNA5SP135-201ENST00000517019 125 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AP001646.1-201ENST00000527936 915 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 FAM92A1P1-201ENST00000528023 890 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC068135.2-201ENST00000569293 1028 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 MTCO1P40-201ENST00000574371 625 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC093838.1-201ENST00000613014 469 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 MTND4P35-201ENST00000604257 1375 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 ZNF849P-201ENST00000594711 1566 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 RN7SKP226-201ENST00000364912 300 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 XGY1-201ENST00000381172 446 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 SNORD65C-201ENST00000390962 71 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 NPM1P10-201ENST00000398310 865 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AL355615.1-201ENST00000406187 641 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 RNU2-47P-201ENST00000410649 186 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC099548.1-201ENST00000421443 426 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 CR848007.2-201ENST00000424918 787 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 GTF2IP20-201ENST00000431663 360 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 RNFT1P2-201ENST00000443064 757 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AL109933.2-201ENST00000452651 260 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 NDUFA5P7-201ENST00000452914 242 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 CDC42P1-201ENST00000456658 548 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 RPS3P1-201ENST00000456781 192 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC113420.1-201ENST00000507903 571 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC048346.1-201ENST00000510247 144 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 MRPS36P2-201ENST00000512569 299 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 SNORA31.18-201ENST00000517043 134 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 RPL7P20-201ENST00000520308 745 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 CR383656.7-201ENST00000548164 174 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 HSPE1P3-201ENST00000559254 309 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC009097.3-201ENST00000563557 1018 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC024614.2-201ENST00000577584 372 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC013553.2-201ENST00000604244 589 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC103710.4-201ENST00000609301 899 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 HMGB1P24-202ENST00000615653 685 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AL162233.1-201ENST00000620014 944 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC090772.4-201ENST00000623599 362 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 AC010149.2-201ENST00000637608 315 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 OR4G11P-202ENST00000642116 1414 ntBASIC1.56□□□□□ -2.16
TRAV1-1A0A0B4J248 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 RNU6-582P-201ENST00000362989 107 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AP002784.2-201ENST00000397300 549 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 RNU2-43P-201ENST00000410306 190 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 Z85995.1-201ENST00000415547 335 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC027124.2-201ENST00000428249 105 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 SDCBPP1-201ENST00000440192 890 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AL592447.1-201ENST00000447592 540 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms