Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RPS3AP24-201ENST00000407896 734 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 NUP35P1-201ENST00000422734 947 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AC019178.2-201ENST00000423595 505 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 RPS15AP28-201ENST00000435088 386 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 TAAR7P-201ENST00000436141 242 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AC092393.1-201ENST00000439625 742 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AL714022.1-201ENST00000439897 151 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 WASF1P1-201ENST00000447560 1131 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AL353718.1-201ENST00000451028 517 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AC008379.1-201ENST00000463655 464 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AC116337.2-201ENST00000477662 156 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AC010486.1-201ENST00000511793 424 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 RNU6-362P-201ENST00000516736 90 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 MIR4298-201ENST00000584380 73 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AP001521.1-201ENST00000609150 300 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 MIR6766-201ENST00000622641 72 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 MIR203B-201ENST00000636080 86 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC062016.1-201ENST00000355719 319 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 RNU6-461P-201ENST00000364195 107 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 RNU6-1035P-201ENST00000384477 107 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 MIR196B-201ENST00000384852 84 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 RNU2-40P-201ENST00000410833 196 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 MTATP6P11-201ENST00000428071 670 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AL512844.2-201ENST00000433990 593 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AL445687.1-201ENST00000439946 251 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 RPS15AP27-201ENST00000449183 343 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 RNU6-717P-201ENST00000459076 104 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC087588.1-201ENST00000462203 316 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 RN7SL432P-201ENST00000484057 298 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 KLRA1P-201ENST00000503499 986 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC010460.2-201ENST00000509054 677 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC113155.1-201ENST00000511141 769 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 COX6CP5-201ENST00000527162 228 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 SNORD53-201ENST00000579969 78 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 MIR4666A-201ENST00000580160 79 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AL390838.2-201ENST00000602394 274 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 DUXAP11-201ENST00000603858 526 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC090132.2-201ENST00000615881 347 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AL163152.1-201ENST00000642001 374 ntBASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USH1CQ9Y6N9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 CR848007.1-201ENST00000442354 1699 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 HMGB1P5-201ENST00000255320 642 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AL589826.1-201ENST00000340697 249 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AL356131.1-201ENST00000405826 414 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 RN7SKP140-201ENST00000411196 284 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 SPA17P1-201ENST00000416656 452 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AL590383.1-201ENST00000428602 75 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AL356867.1-201ENST00000429623 299 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 MTCYBP3-201ENST00000445588 1137 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AL353691.1-201ENST00000451332 387 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 SUMO2P2-201ENST00000456482 255 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC090515.1-201ENST00000465295 476 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AL135752.1-201ENST00000479477 471 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 OR4G11P-201ENST00000492842 939 ntBASIC2.23□□□□□ -2.05
USH1CQ9Y6N9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms