Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC073415.1-201ENST00000449240 153 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RPL7L1P8-201ENST00000469911 741 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 TRBV1-201ENST00000476502 284 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RPL38P4-201ENST00000502376 214 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC091885.1-201ENST00000506658 268 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC108475.1-201ENST00000507880 950 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-927P-201ENST00000516199 100 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNA5SP315-201ENST00000516340 116 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNA5SP468-201ENST00000516782 93 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 RNA5SP312-201ENST00000517068 116 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 ADI1P3-201ENST00000549509 470 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC106785.1-201ENST00000565935 262 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC022968.1-201ENST00000567372 442 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC024619.4-201ENST00000580924 316 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC060780.3-201ENST00000589464 80 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AL591034.3-201ENST00000605511 685 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AL359547.2-201ENST00000615810 418 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 MIR8059-201ENST00000620427 81 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AC103858.2-201ENST00000621471 543 ntBASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA3Q9Y5H0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 NACAP2-201ENST00000318548 624 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-1287P-201ENST00000362914 107 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 SNORD115-7-201ENST00000365306 82 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-1029P-201ENST00000384109 107 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-1060P-201ENST00000384664 107 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 MIR3074-201ENST00000384885 81 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 MIR514A1-201ENST00000385133 98 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 SNORD37.1-201ENST00000390968 65 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 SOD2P1-201ENST00000396543 562 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AL136116.1-201ENST00000403591 381 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 PPIAP31-201ENST00000405422 495 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 OR6C66P-201ENST00000414917 930 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 SNRPGP5-201ENST00000456003 220 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RPS29P15-201ENST00000458329 171 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC087588.1-201ENST00000462203 316 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RPL23AP11-201ENST00000475260 469 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC233702.1-201ENST00000482905 502 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 SNORA31.3-201ENST00000516029 96 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU2-58P-201ENST00000516403 183 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RN7SKP219-201ENST00000516825 296 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 RN7SKP60-201ENST00000516985 239 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 NRON-201ENST00000517270 370 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 TRAV8-5-201ENST00000537369 341 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 OR8R1P-201ENST00000543943 764 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 MIR4703-201ENST00000577728 79 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC015917.1-201ENST00000579654 510 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC034229.5-201ENST00000624258 185 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AC106871.1-201ENST00000568324 3102 ntBASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms