Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.13□□□□□ -2.07
SHANK2Q9UPX8 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.13□□□□□ -2.07
SHANK2Q9UPX8 AC006329.2-201ENST00000611491 394 ntBASIC2.13□□□□□ -2.07
SHANK2Q9UPX8 AC025016.1-201ENST00000616746 682 ntBASIC2.13□□□□□ -2.07
SHANK2Q9UPX8 AC006249.1-201ENST00000621223 471 ntBASIC2.13□□□□□ -2.07
SHANK2Q9UPX8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.13□□□□□ -2.07
SHANK2Q9UPX8 Y_RNA.393-201ENST00000383936 102 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 AL365400.1-201ENST00000431854 640 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 HMGB1P45-201ENST00000435986 653 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 RPL17P49-201ENST00000443728 411 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 SSXP4-201ENST00000451349 245 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 AC008885.2-201ENST00000509506 930 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 FAM106DP-201ENST00000586416 501 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 AC145207.9-201ENST00000623802 325 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 PABPC1P7-201ENST00000413177 1513 ntBASIC2.12□□□□□ -2.07
SHANK2Q9UPX8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 RNU2-32P-201ENST00000411193 191 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 TRIM60P13-201ENST00000432350 1283 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 AC090774.1-201ENST00000435925 246 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 AP002345.1-201ENST00000456493 928 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 HMGN2P16-201ENST00000456802 261 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 HMGN2P13-201ENST00000476476 274 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 MTCO2P32-201ENST00000514865 403 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 AC080078.3-201ENST00000605407 463 ntBASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHANK2Q9UPX8 AC011477.1-204ENST00000623416 1325 ntBASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 MIR607-201ENST00000385241 96 ntBASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 AC104472.2-201ENST00000469035 601 ntBASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 TRBV8-1-201ENST00000481590 279 ntBASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 AC010928.2-201ENST00000588017 287 ntBASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 AC008121.3-201ENST00000618726 433 ntBASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 AC022079.2-201ENST00000619739 566 ntBASIC2.1□□□□□ -2.07
SHANK2Q9UPX8 SNORA51.2-201ENST00000364595 132 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 RNU1-52P-201ENST00000384190 164 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 RNU6-882P-201ENST00000391025 103 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 MIR548J-201ENST00000408833 112 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 RNU2-71P-201ENST00000411395 189 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 AC069277.2-201ENST00000454211 432 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 AC022493.1-201ENST00000492984 337 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 MTATP6P22-201ENST00000507369 598 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 RNA5SP476-201ENST00000516613 103 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 RNU1-104P-201ENST00000517280 175 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 MIR203B-201ENST00000636080 86 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 RBBP8P1-201ENST00000449447 1844 ntBASIC2.09□□□□□ -2.07
SHANK2Q9UPX8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 MIR1304-201ENST00000408243 91 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 COX6CP12-201ENST00000446748 202 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 RPL21P104-201ENST00000464143 478 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AC006499.2-201ENST00000513470 337 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 RNA5SP436-201ENST00000516020 115 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 RNU1-61P-201ENST00000516107 151 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 SNORD59.2-201ENST00000516873 68 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AL161912.3-201ENST00000605404 628 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AP005137.2-201ENST00000609238 400 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AC083806.3-201ENST00000614016 455 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AP003072.4-201ENST00000624580 310 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AC116618.1-201ENST00000634617 774 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 ICE2P2-201ENST00000483823 2787 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.08□□□□□ -2.08
SHANK2Q9UPX8 AC098592.2-201ENST00000413158 265 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AL445183.3-201ENST00000414168 502 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AL512661.1-201ENST00000434586 1253 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 OR10R1P-201ENST00000441524 1141 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 RPL23AP41-201ENST00000484754 458 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 FABP5P5-201ENST00000515537 406 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 Y_RNA.675-201ENST00000516389 149 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AC068135.2-201ENST00000569293 1028 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AL109653.1-201ENST00000603091 248 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 CKS1BP5-201ENST00000434172 273 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 CALM1P1-201ENST00000442082 433 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms