Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RN7SL274P-201ENST00000492268 272 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 SNORA31.11-201ENST00000516528 139 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC093331.1-201ENST00000521474 169 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 Y_RNA.495-201ENST00000384435 112 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 MIR329-2-201ENST00000385029 84 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 JTBP1-201ENST00000441314 247 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC023790.1-201ENST00000482174 347 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 RNU6-491P-201ENST00000516099 110 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC007229.1-201ENST00000590455 412 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 Z99129.2-201ENST00000619967 314 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 Y_RNA.15-201ENST00000362420 102 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 RNA5SP129-201ENST00000410276 118 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 OSTCP8-201ENST00000445117 448 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC109464.2-201ENST00000510242 943 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 RPL23AP78-201ENST00000599928 470 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC092447.10-201ENST00000620607 1652 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC108059.3-201ENST00000456388 214 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 RNU6-513P-201ENST00000516104 104 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC078899.5-201ENST00000612475 178 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 SNORA40.6-201ENST00000391153 128 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 CYCSP48-201ENST00000417124 323 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 NEFMP1-201ENST00000443423 1006 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AP000857.1-201ENST00000532151 543 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC023813.2-201ENST00000564321 469 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AP000787.2-201ENST00000604432 568 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 HMGB1P50-201ENST00000605814 607 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 AC008121.3-201ENST00000618726 433 ntBASIC0.72□□□□□ -2.29
MACF1Q9UPN3 MTND4P23-201ENST00000447723 1363 ntBASIC0.71□□□□□ -2.29
MACF1Q9UPN3 RNU6-25P-201ENST00000383873 107 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RNU6-29P-201ENST00000384637 107 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RPL23AP29-201ENST00000397284 453 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC019070.1-201ENST00000415008 1024 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RPS15AP10-201ENST00000432472 382 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 USP9YP15-201ENST00000442391 422 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 COX6CP2-201ENST00000444980 225 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RPL21P71-201ENST00000465598 459 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC090096.1-201ENST00000489168 390 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 SNORA3.4-201ENST00000515969 96 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RNU6-27P-201ENST00000516146 107 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC084364.2-201ENST00000546924 395 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 MIR518A2-201ENST00000384966 87 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RN7SKP101-201ENST00000411376 320 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 FCF1P2-201ENST00000415284 583 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 ARL5AP3-201ENST00000439327 386 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC103705.1-201ENST00000619013 241 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RMST_7.1-201ENST00000621935 268 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 CYP3A51P-201ENST00000633513 256 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 MIR924-201ENST00000638017 53 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 OR5H6-203ENST00000642105 978 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RPL30P2-201ENST00000414021 291 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 XIST-201ENST00000416330 750 ntTSL 2 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AL590556.1-201ENST00000423231 483 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RPL21P18-201ENST00000469899 480 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RPL31P52-201ENST00000407532 367 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 XKRYP4-201ENST00000414395 483 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 XKRYP5-201ENST00000449659 483 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 RNU6-1247P-201ENST00000516622 98 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC068657.1-201ENST00000520807 306 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.71□□□□□ -2.3
MACF1Q9UPN3 GLUD1P4-201ENST00000590914 418 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC091925.1-201ENST00000623204 462 ntBASIC0.71□□□□□ -2.3
MACF1Q9UPN3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms