Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 FRG1KP-201ENST00000623592 341 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 SNORD116-4-201ENST00000384733 96 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 RNA5SP171-201ENST00000391071 115 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 HMGN2P8-201ENST00000391458 268 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 HLFP1-201ENST00000402375 499 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC018644.1-201ENST00000429934 551 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 FCF1P1-201ENST00000432690 571 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AL136380.1-201ENST00000447970 162 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 SNRPGP6-201ENST00000451124 220 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 RPS27AP1-201ENST00000475545 471 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AP002812.1-201ENST00000495378 474 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC138853.1-201ENST00000503549 823 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 HMGN1P11-201ENST00000508668 303 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC022616.3-201ENST00000523940 148 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC087883.1-201ENST00000551882 391 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 MIR3167-201ENST00000579623 85 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC002545.1-201ENST00000592511 181 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 DPPA3P3-201ENST00000603842 430 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC039056.2-201ENST00000622261 511 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC068880.5-201ENST00000624331 290 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 PRO1804-201ENST00000623780 2050 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 AC006504.1-201ENST00000562493 3666 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCN3Q9P1Z3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 OR5J1P-201ENST00000313544 939 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 RNU6-511P-201ENST00000363496 107 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 RNU5A-6P-201ENST00000384136 116 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 Y_RNA.517-201ENST00000384551 106 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AL590383.1-201ENST00000428602 75 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 MTATP6P30-201ENST00000443540 664 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 CEACAMP4-201ENST00000457676 421 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 TPTE2P5-203ENST00000458118 728 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 UBE2CP3-201ENST00000502715 450 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 RNU7-51P-201ENST00000516560 62 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 RNU6-1220P-201ENST00000517126 108 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC008011.1-201ENST00000545989 227 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC124947.2-202ENST00000552735 133 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AL391840.1-201ENST00000571144 367 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC012531.5-201ENST00000611375 151 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC005332.10-201ENST00000612725 619 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC091905.1-201ENST00000624400 311 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 ZNF285B-201ENST00000561698 1767 ntBASIC3.53□□□□□ -1.84
HCN3Q9P1Z3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 AC092447.7-201ENST00000422212 1621 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 RNU6-701P-201ENST00000384059 107 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 RNA5SP424-201ENST00000390988 115 ntBASIC3.52□□□□□ -1.85
HCN3Q9P1Z3 RPL17P50-201ENST00000396131 546 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms