Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC025518.1-201ENST00000479856 347 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 RPL31P13-201ENST00000484151 370 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC109927.2-201ENST00000506416 303 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC011352.1-201ENST00000512300 793 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC022483.1-201ENST00000514020 567 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 Y_RNA.672-201ENST00000516289 104 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AP003497.1-201ENST00000528472 562 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC087481.2-201ENST00000565492 330 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC034105.4-201ENST00000568304 277 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC060771.1-201ENST00000582031 164 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 MIR4801-201ENST00000582704 82 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC011468.4-201ENST00000603942 409 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AL590099.1-201ENST00000615276 138 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AL158209.2-201ENST00000619266 216 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC012150.2-201ENST00000621300 544 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC009268.2-201ENST00000621925 457 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AC039056.2-201ENST00000622261 511 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 MIR7153-201ENST00000637758 57 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 AF117829.1-206ENST00000621883 3802 ntBASIC3.52□□□□□ -1.85
SMARCAL1Q9NZC9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC091152.2-201ENST00000591628 2569 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 Y_RNA.296-201ENST00000364930 108 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 SNORA73.2-201ENST00000364946 201 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 RNU6-805P-201ENST00000365643 106 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 MIR607-201ENST00000385241 96 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 RNU4-78P-201ENST00000410940 126 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC245052.5-201ENST00000416320 649 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 MTND1P23-201ENST00000416931 372 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC245291.1-201ENST00000419501 328 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 EIF1P1-201ENST00000421436 341 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 EZH2P1-201ENST00000431167 291 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 ARPC3P1-201ENST00000437218 533 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC079448.1-201ENST00000449377 373 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC104308.1-201ENST00000454621 333 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AP1S2P1-201ENST00000457344 379 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 RN7SL330P-201ENST00000469709 307 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC126182.1-201ENST00000478134 357 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC021382.1-201ENST00000483523 359 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC124947.2-202ENST00000552735 133 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL845331.3-202ENST00000562856 261 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL391840.1-201ENST00000571144 367 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 MIR3682-201ENST00000581338 84 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL022154.1-201ENST00000604698 785 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 RBM11P1-201ENST00000604951 799 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL157786.1-207ENST00000627771 695 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AL034408.1-202ENST00000636088 415 ntBASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMARCAL1Q9NZC9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 OR5J1P-201ENST00000313544 939 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 OR4G2P-201ENST00000328113 903 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms