Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 AP001486.2-201ENST00000561652 5113 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX56Q9NY93 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX56Q9NY93 Y_RNA.6-201ENST00000362350 114 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 RNA5SP509-201ENST00000364577 119 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 RNA5SP366-201ENST00000365454 123 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 PTMAP5-201ENST00000393073 333 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 RNU6-1077P-201ENST00000410506 102 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 RNA5SP39-201ENST00000411245 120 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC016769.2-201ENST00000414815 475 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 OR51A5P-201ENST00000415429 942 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC114491.1-201ENST00000416095 246 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 SDCBPP3-201ENST00000419629 891 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 MTCO2P19-201ENST00000427513 598 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 BTF3P10-201ENST00000433415 495 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AL451050.1-201ENST00000450126 415 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 MRPS17P3-201ENST00000465453 385 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC011276.1-201ENST00000469688 323 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 RPS3AP14-201ENST00000483907 780 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 RPS26P15-201ENST00000488067 348 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC010460.1-201ENST00000507087 466 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 RANP3-201ENST00000530970 276 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 OR5B19P-201ENST00000531766 928 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC025449.1-201ENST00000603896 529 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC010591.1-201ENST00000603941 649 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC017083.3-201ENST00000609955 700 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 ZNF962P-201ENST00000443465 3140 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 AL359693.1-201ENST00000614959 2407 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 API5P2-201ENST00000397055 1498 ntBASIC4.28□□□□□ -1.72
DDX56Q9NY93 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX56Q9NY93 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX56Q9NY93 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX56Q9NY93 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX56Q9NY93 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX56Q9NY93 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX56Q9NY93 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX56Q9NY93 RNU6-517P-201ENST00000384362 110 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 RNU6-1035P-201ENST00000384477 107 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 MIR181A1-201ENST00000385026 110 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 MIR591-201ENST00000385290 95 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC007390.1-201ENST00000415722 356 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC245028.1-201ENST00000423259 256 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 ELOCP14-201ENST00000428070 331 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 COX6B1P7-201ENST00000430845 235 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 ELOCP7-201ENST00000439968 331 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 DPPA3P1-201ENST00000448050 469 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 RNU6-314P-201ENST00000516574 104 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 Y_RNA.689-201ENST00000516589 107 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 OR5AL2P-201ENST00000532185 920 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 OR5BN1P-201ENST00000532955 829 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 HIGD1AP1-201ENST00000550979 275 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 MIR5096-201ENST00000583713 70 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AL391646.1-201ENST00000603860 190 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC022893.3-201ENST00000607665 437 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC012409.4-201ENST00000612923 249 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AL359880.1-201ENST00000621879 266 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC093648.1-201ENST00000623546 606 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 AC091152.2-201ENST00000591628 2569 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AL353746.1-201ENST00000566293 6881 ntBASIC4.27□□□□□ -1.73
DDX56Q9NY93 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX56Q9NY93 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX56Q9NY93 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
DDX56Q9NY93 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
DDX56Q9NY93 ZNF680P1-201ENST00000436625 1469 ntBASIC4.26□□□□□ -1.73
DDX56Q9NY93 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX56Q9NY93 SNORA60-201ENST00000362396 134 ntBASIC4.26□□□□□ -1.73
DDX56Q9NY93 RNU6-1085P-201ENST00000363576 107 ntBASIC4.26□□□□□ -1.73
DDX56Q9NY93 Y_RNA.159-201ENST00000363674 87 ntBASIC4.26□□□□□ -1.73
DDX56Q9NY93 SNORA62.1-201ENST00000364287 154 ntBASIC4.26□□□□□ -1.73
DDX56Q9NY93 RNU6-512P-201ENST00000364438 103 ntBASIC4.26□□□□□ -1.73
DDX56Q9NY93 RNU6-61P-201ENST00000365528 109 ntBASIC4.26□□□□□ -1.73
DDX56Q9NY93 RNU6-140P-201ENST00000384566 108 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms