Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MIR4293-201ENST00000584305 78 ntBASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 AC091178.1-203ENST00000584586 279 ntBASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 AC091979.2-201ENST00000607514 214 ntBASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 AC012409.4-201ENST00000612923 249 ntBASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 RN7SL722P-201ENST00000617780 284 ntBASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 RN7SL565P-201ENST00000618246 284 ntBASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PARPBPQ9NWS1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 BDP1P-201ENST00000582658 1990 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 RNU6-1115P-201ENST00000362490 106 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 RNU1-108P-201ENST00000362556 161 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 Y_RNA.212-201ENST00000364177 102 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 Y_RNA.527-201ENST00000384573 102 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 U3.29-201ENST00000391296 212 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 HMGB3P2-201ENST00000411913 584 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 MCFD2P1-201ENST00000417812 300 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 RPL7P46-201ENST00000425129 740 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AL138785.1-201ENST00000425821 331 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 RPS12P10-201ENST00000427031 377 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC105402.2-201ENST00000438503 358 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 TXNP1-201ENST00000441872 371 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AL035666.1-201ENST00000446195 348 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC016696.1-201ENST00000446949 318 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 MTND1P17-201ENST00000448961 204 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AL645939.1-201ENST00000453429 797 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 RNU7-59P-201ENST00000459101 61 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC108022.1-201ENST00000493466 478 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC104806.1-201ENST00000508720 308 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 OR11H5P-201ENST00000554039 926 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC004817.2-201ENST00000561794 651 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 MIR5690-201ENST00000583739 73 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 NF1P5-201ENST00000588287 448 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC011373.1-201ENST00000607270 237 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AP001486.3-201ENST00000615334 372 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 uc_338.11-201ENST00000619132 160 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 AC008013.2-202ENST00000637965 364 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 MTND5P30-201ENST00000452896 1731 ntBASIC4.06□□□□□ -1.76
PARPBPQ9NWS1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 API5P2-201ENST00000397055 1498 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 RNU6-601P-201ENST00000384540 107 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 Y_RNA.557-201ENST00000384680 107 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 SOD2P1-201ENST00000396543 562 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 MRPL42P3-201ENST00000401492 326 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 RNU6-954P-201ENST00000411355 107 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 RNA5SP107-201ENST00000411358 122 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 AC114482.1-201ENST00000418010 247 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 CBX3P6-201ENST00000430257 527 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 AL731563.1-201ENST00000442202 214 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 TDGF1P1-201ENST00000445734 527 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 CEACAMP6-201ENST00000452007 574 ntBASIC4.05□□□□□ -1.76
PARPBPQ9NWS1 HMGB3P21-201ENST00000452483 547 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms