Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RPS15AP17-201ENST00000470598 390 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 RPL30P5-201ENST00000494923 336 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC114322.1-201ENST00000506771 926 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC109464.2-201ENST00000510242 943 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC109329.2-201ENST00000519658 482 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 RPL7P20-201ENST00000520308 745 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AP003066.2-201ENST00000529375 555 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 OR4R1P-201ENST00000529879 463 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC125611.1-201ENST00000549563 229 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC087897.1-201ENST00000550134 156 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC027176.1-201ENST00000560204 514 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC234778.2-201ENST00000566241 354 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC025281.1-201ENST00000567026 265 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AL390838.2-201ENST00000602394 274 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AF131215.7-201ENST00000602443 707 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 PABPC1P9-201ENST00000426076 1612 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC107982.1-201ENST00000507171 1300 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC012321.1-201ENST00000561622 1588 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 SNRPEP3-201ENST00000338402 276 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 RPS4XP8-201ENST00000402039 771 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 RPS7P9-201ENST00000414704 586 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AL358075.3-201ENST00000426289 226 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC009414.1-201ENST00000427200 443 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 MTCYBP42-201ENST00000444653 1130 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC087588.1-201ENST00000462203 316 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AL049873.1-201ENST00000480540 376 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC119751.5-201ENST00000514077 770 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC087808.1-201ENST00000520501 361 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 NDUFS5P6-201ENST00000529136 295 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC090888.1-201ENST00000561335 1141 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 MIR4637-201ENST00000582405 84 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC105224.1-201ENST00000587055 421 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC010975.3-201ENST00000618727 978 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AP000943.4-201ENST00000622912 357 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 AC079597.1-201ENST00000624306 508 ntBASIC2.36□□□□□ -2.03
TREX1Q9NSU2 CR848007.1-201ENST00000442354 1699 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 Z82209.1-201ENST00000422141 2135 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 ANKRD36P1-201ENST00000344424 659 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 RNU6-461P-201ENST00000364195 107 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 RN7SKP140-201ENST00000411196 284 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 RPS15AP27-201ENST00000449183 343 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC092902.1-201ENST00000486999 259 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 LINC00888-204ENST00000487386 421 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC090453.1-201ENST00000495560 436 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 TMEM251P1-201ENST00000503717 318 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 RNU6-798P-201ENST00000516912 103 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC103783.1-201ENST00000520506 373 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC022861.1-201ENST00000522981 663 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC078814.3-201ENST00000553036 491 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 ACTR3BP3-201ENST00000565577 979 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 MIR3162-201ENST00000581818 82 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 MIR3117-201ENST00000584034 78 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC008507.2-201ENST00000588402 1176 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC005498.1-201ENST00000592125 465 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC004853.1-201ENST00000604902 698 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms