Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AC006390.1-201ENST00000508068 283 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AC074250.1-201ENST00000511117 192 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 RN7SKP298-201ENST00000515950 94 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 RNU6-201P-201ENST00000517100 61 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AP003122.4-201ENST00000530980 758 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 SETP7-201ENST00000552169 453 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 RPL21P5-201ENST00000554662 472 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AC034268.2-201ENST00000571784 482 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 UBE2L4-201ENST00000587688 464 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AL359999.1-201ENST00000604513 294 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 YPEL5P2-201ENST00000605553 359 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AL021997.1-201ENST00000605757 193 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AC098614.4-201ENST00000607601 462 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AC109347.2-201ENST00000610220 349 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 U73479.1-201ENST00000618062 168 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AC068792.1-201ENST00000621354 417 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AL158801.5-201ENST00000623123 465 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 MTND5P33-201ENST00000571250 1450 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 PNPT1P2-201ENST00000456768 2050 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 AC092447.7-201ENST00000422212 1621 ntBASIC3.26□□□□□ -1.89
SIX2Q9NPC8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
SIX2Q9NPC8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC092125.1-201ENST00000562568 1995 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 Y_RNA.41-201ENST00000362646 102 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 RNU6-1042P-201ENST00000384204 107 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC078974.1-201ENST00000411597 223 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AF274854.1-201ENST00000413236 615 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 RWDD4P2-201ENST00000426392 563 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 RPL37P4-201ENST00000448908 268 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC117440.1-201ENST00000474107 571 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 RN7SL633P-201ENST00000488974 297 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC006445.1-201ENST00000491925 405 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC138853.1-201ENST00000503549 823 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 RPL37P25-201ENST00000507308 276 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 NDUFB4P2-201ENST00000509515 391 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AL157394.1-201ENST00000562983 1224 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC009063.1-201ENST00000563342 702 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC090578.1-201ENST00000604955 591 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 RNA5SP108-201ENST00000605921 117 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC008498.1-201ENST00000613012 531 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 AC018755.4-201ENST00000619715 454 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 GABRG2-229ENST00000641017 3628 ntBASIC3.25□□□□□ -1.89
SIX2Q9NPC8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX2Q9NPC8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX2Q9NPC8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SIX2Q9NPC8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX2Q9NPC8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX2Q9NPC8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX2Q9NPC8 MTND5P3-201ENST00000438536 1800 ntBASIC3.24□□□□□ -1.89
SIX2Q9NPC8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SIX2Q9NPC8 FRG1BP-201ENST00000278882 761 ntBASIC3.24□□□□□ -1.89
SIX2Q9NPC8 MIR7-3-201ENST00000384898 110 ntBASIC3.24□□□□□ -1.89
SIX2Q9NPC8 U3.20-201ENST00000390909 217 ntBASIC3.24□□□□□ -1.89
SIX2Q9NPC8 RN7SKP220-201ENST00000410611 288 ntBASIC3.24□□□□□ -1.89
SIX2Q9NPC8 RNU4-78P-201ENST00000410940 126 ntBASIC3.24□□□□□ -1.89
SIX2Q9NPC8 AC092447.6-201ENST00000414578 210 ntBASIC3.24□□□□□ -1.89
SIX2Q9NPC8 AL353777.1-201ENST00000425552 326 ntBASIC3.24□□□□□ -1.89
SIX2Q9NPC8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX2Q9NPC8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms